RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 KPRPQ5T749 579 aaPredicted RBP13.04□□□□□ -0.32
SNX1-213ENST00000561026 SAMD5Q5TGI4 173 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 TRAPPC6BQ86SZ2 158 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 LYG1Q8N1E2 194 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 ACBD7Q8N6N7 88 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 OR51A4Q8NGJ6 313 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 OR10AC1Q8NH08 325 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 NDNFQ8TB73 568 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 WNT10AQ9GZT5 417 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 GSTK1Q9Y2Q3 226 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 ORC6Q9Y5N6 252 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 SIRPB1O00241 398 aa13.03□□□□□ -0.32
SNX1-213ENST00000561026 EI24O14681 340 aa13.03□□□□□ -0.32
SNX1-213ENST00000561026 OR2H2O95918 312 aa13.03□□□□□ -0.32
SNX1-213ENST00000561026 HTR1AP08908 422 aa13.03□□□□□ -0.32
SNX1-213ENST00000561026 OCM2P0CE71 109 aa13.03□□□□□ -0.32
SNX1-213ENST00000561026 OCMP0CE72 109 aaPredicted RBP13.03□□□□□ -0.32
SNX1-213ENST00000561026 HTR1DP28221 377 aa13.03□□□□□ -0.32
SNX1-213ENST00000561026 NSUN5P1Q3KNT7 163 aa13.03□□□□□ -0.32
SNX1-213ENST00000561026 Q6ZS46 218 aa13.03□□□□□ -0.32
SNX1-213ENST00000561026 RNF144BQ7Z419 303 aa13.03□□□□□ -0.32
SNX1-213ENST00000561026 OR13C3Q8NGS6 347 aa13.03□□□□□ -0.32
SNX1-213ENST00000561026 RFT1Q96AA3 541 aa13.03□□□□□ -0.32
SNX1-213ENST00000561026 PELI1Q96FA3 418 aa13.03□□□□□ -0.32
SNX1-213ENST00000561026 EXOSC4Q9NPD3 245 aaKnown RBP13.03□□□□□ -0.32
SNX1-213ENST00000561026 EXOGQ9Y2C4 368 aaKnown RBP13.03□□□□□ -0.32
SNX1-213ENST00000561026 PLXNB1O43157 2135 aa13.02□□□□□ -0.32
SNX1-213ENST00000561026 TRGV10A0A0A0MS01 117 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 SNTNA6NMZ2 147 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 OR4C45A6NMZ5 311 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 H3BUI4 141 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 J3QLW9 94 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 PEX14O75381 377 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 KDM4BO94953 1096 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 ZNF19P17023 458 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 LMO1P25800 156 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 IL18R1Q13478 541 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 ZIK1Q3SY52 487 aaPredicted RBP13.02□□□□□ -0.33
SNX1-213ENST00000561026 OR52W1Q6IF63 320 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 HEPN1Q6WQI6 88 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 NDUFA11Q86Y39 141 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 ABHD12Q8N2K0 398 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 OR4P4Q8NGL7 312 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 CORO2AQ92828 525 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 C4orf36Q96KX1 117 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 SPACA5Q96QH8 159 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 OR5M11Q96RB7 305 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 CITED2Q99967 270 aaPredicted RBP13.02□□□□□ -0.33
SNX1-213ENST00000561026 COMMD4Q9H0A8 199 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 GAL3ST2Q9H3Q3 398 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 RHOFQ9HBH0 211 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 DPM3Q9P2X0 92 aa13.02□□□□□ -0.33
SNX1-213ENST00000561026 FUOMA2VDF0 154 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 H3BNX3 289 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 CDK2P24941 298 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 GLIPR1P48060 266 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 ALDH3A2P51648 485 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 BDH1Q02338 343 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 AESQ08117 197 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 ALKBH1Q13686 389 aaKnown RBP13.01□□□□□ -0.33
SNX1-213ENST00000561026 PRAMEF5Q5TYX0 476 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 BAIAP2L2Q6UXY1 529 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 RTN4RL2Q86UN3 420 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 SAXO1Q8IYX7 474 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 OR5D18Q8NGL1 313 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 OR13C9Q8NGT0 318 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 LGALS12Q96DT0 336 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 MMP28Q9H239 520 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 TAS2R3Q9NYW6 316 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 AASSQ9UDR5 926 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 PCDHGB5Q9Y5G0 923 aa13.01□□□□□ -0.33
SNX1-213ENST00000561026 ADARB2-AS1A8MUL3 147 aa13□□□□□ -0.33
SNX1-213ENST00000561026 ALDOBP05062 364 aa13□□□□□ -0.33
SNX1-213ENST00000561026 SCN1BQ07699 218 aa13□□□□□ -0.33
SNX1-213ENST00000561026 GALEQ14376 348 aa13□□□□□ -0.33
SNX1-213ENST00000561026 ARSJQ5FYB0 599 aaPredicted RBP13□□□□□ -0.33
SNX1-213ENST00000561026 LHFPL3Q86UP9 236 aa13□□□□□ -0.33
SNX1-213ENST00000561026 CHST4Q8NCG5 386 aa13□□□□□ -0.33
SNX1-213ENST00000561026 OR4F17Q8NGA8 305 aa13□□□□□ -0.33
SNX1-213ENST00000561026 ZNF596Q8TC21 504 aa13□□□□□ -0.33
SNX1-213ENST00000561026 R3HDM4Q96D70 268 aa13□□□□□ -0.33
SNX1-213ENST00000561026 MRPL48Q96GC5 212 aaKnown RBP13□□□□□ -0.33
SNX1-213ENST00000561026 OR4F4Q96R69 305 aa13□□□□□ -0.33
SNX1-213ENST00000561026 MYCBPQ99417 103 aaPredicted RBP13□□□□□ -0.33
SNX1-213ENST00000561026 OCSTAMPQ9BR26 566 aa13□□□□□ -0.33
SNX1-213ENST00000561026 ZCCHC4Q9H5U6 513 aa13□□□□□ -0.33
SNX1-213ENST00000561026 NEK6Q9HC98 313 aa13□□□□□ -0.33
SNX1-213ENST00000561026 KIAA2026Q5HYC2 2103 aa13□□□□□ -0.33
SNX1-213ENST00000561026 XPNPEP2O43895 674 aa12.99□□□□□ -0.33
SNX1-213ENST00000561026 ALX3O95076 343 aa12.99□□□□□ -0.33
SNX1-213ENST00000561026 IGLV1-47P01700 117 aa12.99□□□□□ -0.33
SNX1-213ENST00000561026 CSN2P05814 226 aa12.99□□□□□ -0.33
SNX1-213ENST00000561026 ZNF44P15621 663 aa12.99□□□□□ -0.33
SNX1-213ENST00000561026 GABRB1P18505 474 aa12.99□□□□□ -0.33
SNX1-213ENST00000561026 VDAC2P45880 294 aaPredicted RBP12.99□□□□□ -0.33
SNX1-213ENST00000561026 KPNB1Q14974 876 aaKnown RBP12.99□□□□□ -0.33
SNX1-213ENST00000561026 TMEM95Q3KNT9 176 aa12.99□□□□□ -0.33
SNX1-213ENST00000561026 ZFP1Q6P2D0 407 aa12.99□□□□□ -0.33
SNX1-213ENST00000561026 Q6P435 159 aa12.99□□□□□ -0.33
SNX1-213ENST00000561026 C16orf82Q7Z2V1 217 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms