RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 OR5M11Q96RB7 305 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 SLC29A1Q99808 456 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 ISG20L2Q9H9L3 353 aaKnown RBP8.24□□□□□ -1.09
LDLR-214ENST00000560628 NEK6Q9HC98 313 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 EXOSC4Q9NPD3 245 aaKnown RBP8.24□□□□□ -1.09
LDLR-214ENST00000560628 SERTAD4Q9NUC0 356 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 MYRFQ9Y2G1 1151 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 LINC00312Q9Y6C7 94 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 SESN1Q9Y6P5 492 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 IGHV2-26A0A0B4J1V2 119 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 SNTNA6NMZ2 147 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 E9PI62 339 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 OR2H2O95918 312 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 TMEM225BP0DP42 221 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 CD28P10747 220 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 CD24P25063 80 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 GLIPR1P48060 266 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 P2RX3P56373 397 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 BLCAPP62952 87 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 AESQ08117 197 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 GALEQ14376 348 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 NSUN5P1Q3KNT7 163 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 PRAMEF5Q5TYX0 476 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 ZFP1Q6P2D0 407 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 CCDC121Q6ZUS5 278 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 ABHD12Q8N2K0 398 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 RHOXF1Q8NHV9 184 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 ALG8Q9BVK2 526 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 CDCA4Q9BXL8 241 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 CLEC7AQ9BXN2 247 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 PRSS22Q9GZN4 317 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 TMEM133Q9H2Q1 129 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 ZCCHC4Q9H5U6 513 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 UBE2J1Q9Y385 318 aaPredicted RBP8.23□□□□□ -1.09
LDLR-214ENST00000560628 CMYA5Q8N3K9 4069 aa8.23□□□□□ -1.09
LDLR-214ENST00000560628 TET2Q6N021 2002 aaPredicted RBP8.22□□□□□ -1.09
LDLR-214ENST00000560628 TRGV10A0A0A0MS01 117 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 A0A0G2JK05 382 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 FAM172BPA6NC97 362 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 G3V4G9 280 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 F2RL2O00254 374 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 DEGS1O15121 323 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 KDM4BO94953 1096 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 MT-ND2P03891 347 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 HCKP08631 526 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 DBTP11182 482 aaKnown RBP8.22□□□□□ -1.09
LDLR-214ENST00000560628 ZNF44P15621 663 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 GABRB1P18505 474 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 CDK2P24941 298 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 HTR1DP28221 377 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 ERP29P30040 261 aaKnown RBP8.22□□□□□ -1.09
LDLR-214ENST00000560628 GDNFP39905 211 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 ARSJQ5FYB0 599 aaPredicted RBP8.22□□□□□ -1.09
LDLR-214ENST00000560628 SPIN3Q5JUX0 258 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 MINOS1Q5TGZ0 78 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 Q6P435 159 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 Q8N2B8 174 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 DTX3Q8N9I9 347 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 MRPL48Q96GC5 212 aaKnown RBP8.22□□□□□ -1.09
LDLR-214ENST00000560628 NR1H4Q96RI1 486 aaPredicted RBP8.22□□□□□ -1.09
LDLR-214ENST00000560628 PDCD1LG2Q9BQ51 273 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 ERVK13-1Q9NX77 482 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 PITPNC1Q9UKF7 332 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 MINOS1-NBL1R4GNA1 71 aa8.22□□□□□ -1.09
LDLR-214ENST00000560628 LOC100130705A0A1B0GUX0 176 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 HSPB6O14558 160 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 PEX14O75381 377 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 FBXO24O75426 580 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 ZFPL1O95159 310 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 FADS2O95864 444 aaKnown RBP8.21□□□□□ -1.1
LDLR-214ENST00000560628 OPN1MWP04001 364 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 OPN1MW2P0DN77 364 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 OPN1MW3P0DN78 364 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 LMO1P25800 156 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 DYNLT3P51808 116 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 GTF2A1P52655 376 aaPredicted RBP8.21□□□□□ -1.1
LDLR-214ENST00000560628 GBX2P52951 348 aaPredicted RBP8.21□□□□□ -1.1
LDLR-214ENST00000560628 IL18R1Q13478 541 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 KISS1Q15726 138 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 TMEM95Q3KNT9 176 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 KRBOX4Q5JUW0 171 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 UTF1Q5T230 341 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 LPCAT4Q643R3 524 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 ZBTB49Q6ZSB9 765 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 SATL1Q86VE3 508 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 SERPINA12Q8IW75 414 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 OR52I1Q8NGK6 324 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 OR5D14Q8NGL3 314 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 OR4P4Q8NGL7 312 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 OR5AK2Q8NH90 309 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 CORO2AQ92828 525 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 STMN2Q93045 179 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 COQ2Q96H96 371 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 Q96MT0 163 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 CITED2Q99967 270 aaPredicted RBP8.21□□□□□ -1.1
LDLR-214ENST00000560628 ZNF649Q9BS31 505 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 C9orf16Q9BUW7 83 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 COMMD4Q9H0A8 199 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 S100A14Q9HCY8 104 aa8.21□□□□□ -1.1
LDLR-214ENST00000560628 FAM118AQ9NWS6 357 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms