RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 KCNJ15Q99712 375 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 PCGF1Q9BSM1 259 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 PBOV1Q9GZY1 135 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 FAM206AQ9NX38 181 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 STEAP1Q9UHE8 339 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 A0A1W2PQ09 198 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 A6NLC8 198 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 CENPXA8MT69 81 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 KCNAB3O43448 404 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 MAS1P04201 325 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 CX3CR1P49238 355 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 MRPS10P82664 201 aaKnown RBP11.23□□□□□ -0.61
SMAD3-214ENST00000560402 GLYATL3Q5SZD4 288 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 HES5Q5TA89 166 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 TEX36Q5VZQ5 186 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 FIP1L1Q6UN15 594 aaKnown RBP11.23□□□□□ -0.61
SMAD3-214ENST00000560402 C17orf107Q6ZR85 190 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 SNX29P2Q8IUI4 249 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 OR4M1Q8NGD0 313 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 OR56B2PQ8NGI1 322 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 OR2AE1Q8NHA4 323 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 ENKURQ8TC29 256 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 SPSB4Q96A44 273 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 RFT1Q96AA3 541 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 S100A16Q96FQ6 103 aaKnown RBP11.23□□□□□ -0.61
SMAD3-214ENST00000560402 DMRTB1Q96MA1 342 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 TBX15Q96SF7 602 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 SOSTQ9BQB4 213 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 PPP1R3EQ9H7J1 279 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 LIN7BQ9HAP6 207 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 C1orf123Q9NWV4 160 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 KAAG1Q9UBP8 84 aa11.23□□□□□ -0.61
SMAD3-214ENST00000560402 C3orf80F5H4A9 247 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 EIF4EP06730 217 aaKnown RBP11.22□□□□□ -0.61
SMAD3-214ENST00000560402 SFTPBP07988 381 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 MELTFP08582 738 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 SNRPBP14678 240 aaKnown RBP11.22□□□□□ -0.61
SMAD3-214ENST00000560402 GNALP38405 381 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 BCAP31P51572 246 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 RUSC1-AS1Q66K80 236 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 OLFML2AQ68BL7 652 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 SFRP4Q6FHJ7 346 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-214ENST00000560402 LRRTM1Q86UE6 522 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 LDLRAD3Q86YD5 345 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 SERPINA12Q8IW75 414 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 RDH10Q8IZV5 341 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 GCSAMQ8N6F7 178 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 OR6M1Q8NGM8 313 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 DYRK2Q92630 601 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 PGAM5Q96HS1 289 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 SDHCQ99643 169 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-214ENST00000560402 CHIAQ9BZP6 476 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 SIRPDQ9H106 197 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 PLEKHA1Q9HB21 404 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 NEK6Q9HC98 313 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 SOX21Q9Y651 276 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-214ENST00000560402 KPTNQ9Y664 436 aa11.22□□□□□ -0.61
SMAD3-214ENST00000560402 IGHV1-69DA0A0B4J2H0 117 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 CENPVL3A0A0U1RRI6 287 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 hCG_1807616A0A1W2PRN6 198 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 ANKRD30BLA7E2S9 258 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 MAGEB3O15480 346 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 SULT1B1O43704 296 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 PAHP00439 452 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 IGHV1-69P01742 117 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 HLA-DQB1P01920 261 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 TTRP02766 147 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 MUC1P15941 1255 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-214ENST00000560402 OMGP23515 440 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 PRKXP51817 358 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 ZNF57Q68EA5 555 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-214ENST00000560402 FAM90A1Q86YD7 464 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 BOLLQ8N9W6 283 aaKnown RBP11.21□□□□□ -0.61
SMAD3-214ENST00000560402 OR52H1Q8NGJ2 320 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 OR5D14Q8NGL3 314 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 OR10AC1Q8NH08 325 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 OR8S1Q8NH09 359 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 C1RLQ9NZP8 487 aa11.21□□□□□ -0.61
SMAD3-214ENST00000560402 CLPSL1A2RUU4 121 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 SLC17A2O00624 439 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 DVL1O14640 695 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 TIMM23O14925 209 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 CTDSPLO15194 276 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 GPR37O15354 613 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 MTRF1O75570 445 aaKnown RBP11.2□□□□□ -0.62
SMAD3-214ENST00000560402 LHBP01229 141 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 GYPAP02724 150 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 GRPP07492 148 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 RAB3AP20336 220 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 BDKRB2P30411 391 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 MAP2K3P46734 347 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 ZNF121P58317 390 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-214ENST00000560402 AP3S2P59780 193 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 FAM189A2Q15884 450 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 BAK1Q16611 211 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 MICBQ29980 383 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 PDLIM3Q53GG5 364 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-214ENST00000560402 BRICD5Q6PL45 260 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 FTMTQ8N4E7 242 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms