RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 IL19Q9UHD0 177 aa9.5□□□□□ -0.89
USP3-218ENST00000560202 SESN1Q9Y6P5 492 aa9.5□□□□□ -0.89
USP3-218ENST00000560202 ANKHD1Q8IWZ3 2542 aaKnown RBP9.5□□□□□ -0.89
USP3-218ENST00000560202 C7orf66A4D0T2 115 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 C17orf100A8MU93 164 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 GEMIN2O14893 280 aaKnown RBP9.49□□□□□ -0.89
USP3-218ENST00000560202 LANCL1O43813 399 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 ADH4P08319 380 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 CD3GP09693 182 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 HIST1H1DP16402 221 aaKnown RBP9.49□□□□□ -0.89
USP3-218ENST00000560202 GNB3P16520 340 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 ZP3P21754 424 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 TNFSF4P23510 183 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 PRSS3P35030 304 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 ERVK11-1P61568 191 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 TNFAIP6P98066 277 aaPredicted RBP9.49□□□□□ -0.89
USP3-218ENST00000560202 SRSF1Q07955 248 aaKnown RBP eCLIP9.49□□□□□ -0.89
USP3-218ENST00000560202 DAZAP2Q15038 168 aaPredicted RBP9.49□□□□□ -0.89
USP3-218ENST00000560202 AANATQ16613 207 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 SPRNQ5BIV9 151 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 NHLRC3Q5JS37 347 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 PLAC9Q5JTB6 97 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 TMEM65Q6PI78 240 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 WDR82Q6UXN9 313 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 MEX3BQ6ZN04 569 aaKnown RBP9.49□□□□□ -0.89
USP3-218ENST00000560202 Q6ZTK2 550 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 RTN4RL2Q86UN3 420 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 COMMD7Q86VX2 200 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 Q8IYB0 196 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 FAM58AQ8N1B3 248 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 POC1AQ8NBT0 407 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 OR52I2Q8NH67 350 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 ITLN1Q8WWA0 313 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 FCAMRQ8WWV6 532 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 EMG1Q92979 244 aaKnown RBP9.49□□□□□ -0.89
USP3-218ENST00000560202 YIPF5Q969M3 257 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 POM121Q96HA1 1249 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 ARHGAP5-AS1Q96IT6 56 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 NRIP2Q9BQI9 281 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 BEX2Q9BXY8 128 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 MED28Q9H204 178 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 C1orf123Q9NWV4 160 aa9.49□□□□□ -0.89
USP3-218ENST00000560202 KLF2Q9Y5W3 355 aaPredicted RBP9.49□□□□□ -0.89
USP3-218ENST00000560202 TMEM235A6NFC5 223 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 KRBOX1C9JBD0 128 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 PRSS44E7EML9 344 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 TOR1AO14656 332 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 CD55P08174 381 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 MELTFP08582 738 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 PRKACAP17612 351 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 ATF4P18848 351 aaPredicted RBP9.48□□□□□ -0.89
USP3-218ENST00000560202 SNU13P55769 128 aaKnown RBP9.48□□□□□ -0.89
USP3-218ENST00000560202 GUCA2AQ02747 115 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 PXDC1Q5TGL8 231 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 DNM1P46Q6ZS02 220 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 OR8H3Q8N146 312 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 MUC15Q8N387 334 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 SEH1LQ96EE3 360 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 MS4A5Q9H3V2 200 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FN3KRPQ9HA64 309 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 DYNLRB1Q9NP97 96 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 IL36RNQ9UBH0 155 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 KCNK7Q9Y2U2 307 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 UBR5O95071 2799 aaPredicted RBP9.48□□□□□ -0.89
USP3-218ENST00000560202 hCG_1807616A0A1W2PRN6 198 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A10PA6NDY2 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A18PA6NE21 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A16PA6NEW6 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A20PA6NIJ5 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A8PA6NJQ4 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A7PA6NKC0 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A22PA8MWA6 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A12PA8MX19 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A5PA8MXJ8 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A23PA8MXZ1 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 C3orf80F5H4A9 247 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 SULT1C2O00338 296 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 MFNGO00587 321 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 NXPH2O95156 264 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 GSTP1P09211 210 aaKnown RBP9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A15PP0C7V4 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A13PP0C7W8 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A14PP0C7W9 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FAM90A24PP0C7X0 464 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 SLC6A1P30531 599 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 GATA4P43694 442 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 S100A12P80511 92 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 ARL6IP1Q15041 203 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 PDCD1Q15116 288 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 SWI5Q1ZZU3 235 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 NKAPLQ5M9Q1 402 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 MOGAT3Q86VF5 341 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 ZCCHC24Q8N2G6 241 aaKnown RBP9.48□□□□□ -0.89
USP3-218ENST00000560202 GPX8Q8TED1 209 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 GIMAP1Q8WWP7 306 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 FBXW5Q969U6 566 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 UPRTQ96BW1 309 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 PECRQ9BY49 303 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 SCPEP1Q9HB40 452 aa9.48□□□□□ -0.89
USP3-218ENST00000560202 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms