RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 SLC25A26Q70HW3 274 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 NUFIP2Q7Z417 695 aaKnown RBP6.96□□□□□ -1.3
SMAD3-212ENST00000559937 CALHM1Q8IU99 346 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 RELL2Q8NC24 303 aaPredicted RBP6.96□□□□□ -1.3
SMAD3-212ENST00000559937 GALNT11Q8NCW6 608 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 HPSE2Q8WWQ2 592 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 BCL2L2Q92843 193 aaPredicted RBP6.96□□□□□ -1.3
SMAD3-212ENST00000559937 WDYHV1Q96HA8 205 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 CYYR1Q96J86 154 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 OR10C1Q96KK4 312 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 ZNF75AQ96N20 296 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 LINC00052Q96N35 136 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 HIST1H2AAQ96QV6 131 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 PAPOLGQ9BWT3 736 aaKnown RBP6.96□□□□□ -1.3
SMAD3-212ENST00000559937 PKIBQ9C010 78 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 SLC5A7Q9GZV3 580 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 LDAHQ9H6V9 325 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 ZNF442Q9H7R0 627 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 PLEKHA2Q9HB19 425 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 BARX1Q9HBU1 254 aaPredicted RBP6.96□□□□□ -1.3
SMAD3-212ENST00000559937 SPACA1Q9HBV2 294 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 CYTL1Q9NRR1 136 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 GPR160Q9UJ42 338 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 FBXO9Q9UK97 447 aaPredicted RBP6.96□□□□□ -1.3
SMAD3-212ENST00000559937 A0A096LPE4 126 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 PIGBOS1A0A0B4J2F0 54 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 KIR2DS1A0A191URI9 304 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 DUXBA0A1W2PPF3 345 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 A0A1W2PPZ6 126 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 ZSCAN5BA6NJL1 495 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 SLC22A20A6NK97 555 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 CD300LBA8K4G0 201 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 CDRT15L2A8MXV6 281 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 H7C1Q1 480 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 BET1O15155 118 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 DEDDO75618 318 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 NAPSAO96009 420 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 IGHG3P01860 377 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 GAPDHP04406 335 aaKnown RBP6.95□□□□□ -1.3
SMAD3-212ENST00000559937 HOXB5P09067 269 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 HOXB1P14653 301 aaPredicted RBP6.95□□□□□ -1.3
SMAD3-212ENST00000559937 FCGR2CP31995 323 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 OPRM1P35372 400 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 KIR2DS4P43632 304 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 FOXG1P55316 489 aaPredicted RBP6.95□□□□□ -1.3
SMAD3-212ENST00000559937 PIGPP57054 158 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 GNG3P63215 75 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 ARG2P78540 354 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 SPEM2Q0P670 501 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 IL24Q13007 206 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 CLN3Q13286 438 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 KIR2DS1Q14954 304 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 DAZAP2Q15038 168 aaPredicted RBP6.95□□□□□ -1.3
SMAD3-212ENST00000559937 TRIP6Q15654 476 aaKnown RBP6.95□□□□□ -1.3
SMAD3-212ENST00000559937 BEX5Q5H9J7 111 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 GGNBP1Q5YKI7 109 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 IGF2-ASQ6U949 168 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.95□□□□□ -1.3
SMAD3-212ENST00000559937 ZNF573Q86YE8 665 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 LGI3Q8N145 548 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 RNF141Q8WVD5 230 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 RTN4IP1Q8WWV3 396 aaPredicted RBP6.95□□□□□ -1.3
SMAD3-212ENST00000559937 EXTL1Q92935 676 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 MARC2Q969Z3 335 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 SAT2Q96F10 170 aaPredicted RBP6.95□□□□□ -1.3
SMAD3-212ENST00000559937 RRNAD1Q96FB5 475 aaKnown RBP6.95□□□□□ -1.3
SMAD3-212ENST00000559937 MARS2Q96GW9 593 aaKnown RBP6.95□□□□□ -1.3
SMAD3-212ENST00000559937 GMPPAQ96IJ6 420 aaPredicted RBP6.95□□□□□ -1.3
SMAD3-212ENST00000559937 ABHD14BQ96IU4 210 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 DMRTA2Q96SC8 542 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 FGF23Q9GZV9 251 aaPredicted RBP6.95□□□□□ -1.3
SMAD3-212ENST00000559937 IFT22Q9H7X7 185 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 OR5AC2Q9NZP5 309 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 LIPGQ9Y5X9 500 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 PTPRBP23467 1997 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 KNTC1P50748 2209 aa6.95□□□□□ -1.3
SMAD3-212ENST00000559937 ZNF503-AS2A6NEH8 195 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 ARGFXA6NJG6 315 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 ANKRD30BLA7E2S9 258 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 MPTX1A8MV57 137 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 ZNF732B4DXR9 585 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 OR7C1O76099 320 aaPredicted RBP6.94□□□□□ -1.3
SMAD3-212ENST00000559937 CNOT4O95628 575 aaKnown RBP6.94□□□□□ -1.3
SMAD3-212ENST00000559937 DIRAS3O95661 229 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 IL18BPO95998 194 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 HOXD4P09016 255 aaPredicted RBP6.94□□□□□ -1.3
SMAD3-212ENST00000559937 WNT2P09544 360 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 BCL3P20749 454 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 HAAOP46952 286 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 TNFSF10P50591 281 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 TGFBR3Q03167 851 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 TGIF1Q15583 401 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 TBC1D28Q2M2D7 210 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 FAM74A1Q5RGS3 127 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 C9orf135Q5VTT2 229 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 ZNF585AQ6P3V2 769 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 IGFL2Q6UWQ7 119 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 FBXW12Q6X9E4 464 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 IL34Q6ZMJ4 242 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 Q8IYB0 196 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms