RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 FGGYQ96C11 551 aa9.32□□□□□ -0.92
USP3-214ENST00000559718 C10orf35Q96D05 121 aa9.32□□□□□ -0.92
USP3-214ENST00000559718 OR4F4Q96R69 305 aa9.32□□□□□ -0.92
USP3-214ENST00000559718 CLEC7AQ9BXN2 247 aa9.32□□□□□ -0.92
USP3-214ENST00000559718 GABARAPL3Q9BY60 117 aa9.32□□□□□ -0.92
USP3-214ENST00000559718 SEBOXQ9HB31 216 aaPredicted RBP9.32□□□□□ -0.92
USP3-214ENST00000559718 AURKAIP1Q9NWT8 199 aaPredicted RBP9.32□□□□□ -0.92
USP3-214ENST00000559718 FRRS1LQ9P0K9 344 aa9.32□□□□□ -0.92
USP3-214ENST00000559718 GSTK1Q9Y2Q3 226 aa9.32□□□□□ -0.92
USP3-214ENST00000559718 SAC3D1A6NKF1 404 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 MGST3O14880 152 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 OR2H2O95918 312 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 UBCP0CG48 685 aaKnown RBP9.31□□□□□ -0.92
USP3-214ENST00000559718 AZGP1P25311 298 aaKnown RBP9.31□□□□□ -0.92
USP3-214ENST00000559718 HTR1DP28221 377 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 GDNFP39905 211 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 P2RX3P56373 397 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 NANOS3P60323 173 aaKnown RBP9.31□□□□□ -0.92
USP3-214ENST00000559718 PDZK1IP1Q13113 114 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 TCTEX1D4Q5JR98 221 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 UTF1Q5T230 341 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 FAM220AQ7Z4H9 259 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 REC114Q7Z4M0 266 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 TRAPPC6BQ86SZ2 158 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 Q8IYB0 196 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 ENTHD1Q8IYW4 607 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 ABHD12Q8N2K0 398 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 DNAAF1Q8NEP3 725 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 OR5AU1Q8NGC0 362 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 OR51A4Q8NGJ6 313 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 OR5D18Q8NGL1 313 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 OR8J1Q8NGP2 316 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 OR10AC1Q8NH08 325 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 PP6455Q8WZ26 134 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 SGCDQ92629 289 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 SPACA5Q96QH8 159 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 HMG20AQ9NP66 347 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 ENOPH1Q9UHY7 261 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 OAZ3Q9UMX2 235 aa9.31□□□□□ -0.92
USP3-214ENST00000559718 SH2D7A6NKC9 451 aaPredicted RBP9.3□□□□□ -0.92
USP3-214ENST00000559718 IGLL1P15814 213 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 ZNF20P17024 532 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 PRKACBP22694 351 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 CDK2P24941 298 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 ERP29P30040 261 aaKnown RBP9.3□□□□□ -0.92
USP3-214ENST00000559718 GLIPR1P48060 266 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 LOXL3P58215 753 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 CD83Q01151 205 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 AESQ08117 197 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 TMED1Q13445 227 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 TMEM244Q5VVB8 128 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 C1orf146Q5VVC0 180 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 FOXB2Q5VYV0 432 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 C10orf99Q6UWK7 81 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 UTS2BQ765I0 119 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 OSBPL10Q9BXB5 764 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 NECAP2Q9NVZ3 263 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 ING3Q9NXR8 418 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 DPM3Q9P2X0 92 aa9.3□□□□□ -0.92
USP3-214ENST00000559718 UBE2J1Q9Y385 318 aaPredicted RBP9.3□□□□□ -0.92
USP3-214ENST00000559718 TRGV10A0A0A0MS01 117 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 J3QRE1 110 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 CYB5AP00167 134 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 LPLP06858 475 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 FCGR1AP12314 374 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 BDH1Q02338 343 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 SCN1BQ07699 218 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 SPIN3Q5JUX0 258 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 HEPN1Q6WQI6 88 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 ZBTB49Q6ZSB9 765 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 LHFPL2Q6ZUX7 228 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 OR13C9Q8NGT0 318 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 RFKQ969G6 155 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 RNFT2Q96EX2 444 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 CENPNQ96H22 339 aaPredicted RBP9.29□□□□□ -0.92
USP3-214ENST00000559718 OPALINQ96PE5 141 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 MBOAT4Q96T53 435 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 ZNF286AQ9HBT8 521 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 EXOSC4Q9NPD3 245 aaKnown RBP9.29□□□□□ -0.92
USP3-214ENST00000559718 AASSQ9UDR5 926 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 GLS2Q9UI32 602 aa9.29□□□□□ -0.92
USP3-214ENST00000559718 DAPL1A0PJW8 107 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 SH2D1BO14796 132 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 SLC16A6O15403 523 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 KDM4BO94953 1096 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 IGLV1-47P01700 117 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 AMY1AP04745 511 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 AMY2AP04746 511 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 ALDOBP05062 364 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 ISG15P05161 165 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 ZNF44P15621 663 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 CD33P20138 364 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 LMO1P25800 156 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 CDC42P60953 191 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 IL18R1Q13478 541 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 ABCA11PQ4W5N1 156 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 Q6P435 159 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 FDX2Q6P4F2 183 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 CCDC121Q6ZUS5 278 aa9.28□□□□□ -0.92
USP3-214ENST00000559718 CENPVQ7Z7K6 275 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms