RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 AMY1AP04745 511 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 AMY2AP04746 511 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 LPLP06858 475 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 OR2T7P0C7T2 308 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 PRKACAP17612 351 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 DUSP1P28562 367 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 ARHGDIBP52566 201 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 ATP1B3P54709 279 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 CDC42P60953 191 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 ISL1P61371 349 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 EGFEM1PQ0D2K5 195 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 ZSCAN26Q16670 478 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 ABCA11PQ4W5N1 156 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 PRAMEF5Q5TYX0 476 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 KDM4DQ6B0I6 523 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 BAIAP2L2Q6UXY1 529 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 TRAPPC6BQ86SZ2 158 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 OR4X2Q8NGF9 303 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 ZNF596Q8TC21 504 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 RBM14Q96PK6 669 aaKnown RBP10.44□□□□□ -0.74
TPM1-220ENST00000559556 HHLA2Q9UM44 414 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 TRGV10A0A0A0MS01 117 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 IGKV1-9A0A0C4DH69 117 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 WI2-2373I1.2A0A1W2PRP0 233 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 CYB5AP00167 134 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 CDK2P24941 298 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 CD24P25063 80 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 HTR1FP30939 366 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 KIR3DL2P43630 455 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 POU3F4P49335 361 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 KRTAP10-11P60412 298 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 DNAL1Q4LDG9 190 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 C11orf87Q6NUJ2 197 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 C10orf99Q6UWK7 81 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 UTS2BQ765I0 119 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 ABHD12Q8N2K0 398 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 CAPSLQ8WWF8 208 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 CORO2AQ92828 525 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 RNF166Q96A37 237 aaPredicted RBP10.43□□□□□ -0.74
TPM1-220ENST00000559556 ADAT3Q96EY9 351 aaPredicted RBP10.43□□□□□ -0.74
TPM1-220ENST00000559556 ADI1Q9BV57 179 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 GABARAPL1Q9H0R8 117 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 ZNF286AQ9HBT8 521 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 INPP5EQ9NRR6 644 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 TAS2R3Q9NYW6 316 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 ENOPH1Q9UHY7 261 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 GLS2Q9UI32 602 aa10.43□□□□□ -0.74
TPM1-220ENST00000559556 DYNC2H1Q8NCM8 4307 aaKnown RBP10.43□□□□□ -0.74
TPM1-220ENST00000559556 A0A087X0M5 115 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 A0A1B0GX30 115 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 FUOMA2VDF0 154 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 LEUTXA8MZ59 168 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 G3V2T6 193 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 SIRPB1O00241 398 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 GYG2O15488 501 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 APOL3O95236 402 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 CLIC3O95833 236 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 CSN2P05814 226 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 LMO1P25800 156 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 CEACAM3P40198 252 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 BNIP1Q12981 228 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 HLA-DRB5Q30154 266 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 LHFPL2Q6ZUX7 228 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 LINC00482Q8N8I6 264 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 OR10H4Q8NGA5 316 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 CREB3L1Q96BA8 519 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 COMMD4Q9H0A8 199 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 HMG20AQ9NP66 347 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 EXOSC4Q9NPD3 245 aaKnown RBP10.42□□□□□ -0.74
TPM1-220ENST00000559556 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.42□□□□□ -0.74
TPM1-220ENST00000559556 PCDHGB5Q9Y5G0 923 aa10.42□□□□□ -0.74
TPM1-220ENST00000559556 FAM172BPA6NC97 362 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 LY6LH3BQJ8 138 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 BUB1B-PAK6H3BSN5 160 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 M0QZK8 103 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 SH2D1BO14796 132 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 OR2H2O95918 312 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 CALCBP10092 127 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 ATF1P18846 271 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 PRKACBP22694 351 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 GDNFP39905 211 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 GLIPR1P48060 266 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 SNU13P55769 128 aaKnown RBP10.41□□□□□ -0.74
TPM1-220ENST00000559556 MTCP1P56278 107 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 AESQ08117 197 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 PDZK1IP1Q13113 114 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 ATP6AP1Q15904 470 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 KHDC1LQ5JSQ8 128 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 TPTE2P1Q5T6R2 138 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 TMEM244Q5VVB8 128 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 ETV3LQ6ZN32 361 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 FAM220AQ7Z4H9 259 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 STMN2Q93045 179 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 SPSB1Q96BD6 273 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 SLC7A6OSQ96CW6 309 aaPredicted RBP10.41□□□□□ -0.74
TPM1-220ENST00000559556 OPALINQ96PE5 141 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 GPR61Q9BZJ8 451 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 GNG8Q9UK08 70 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 LYSTQ99698 3801 aa10.41□□□□□ -0.74
TPM1-220ENST00000559556 HUWE1Q7Z6Z7 4374 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms