RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SNU13P55769 128 aaKnown RBP3.59□□□□□ -1.83
SNX1-205ENST00000559339 RPL15P61313 204 aaKnown RBP3.59□□□□□ -1.83
SNX1-205ENST00000559339 RELBQ01201 579 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 BDH1Q02338 343 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 SCN1BQ07699 218 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 GPR176Q14439 515 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 EDDM3AQ14507 147 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 MED22Q15528 200 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 Q499Y3 187 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 MIDNQ504T8 468 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 C6orf141Q5SZD1 244 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 DDI2Q5TDH0 399 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 RUSC1-AS1Q66K80 236 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 TMEM200BQ69YZ2 307 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 GDPGP1Q6ZNW5 385 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 FGFRL1Q8N441 504 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 MS4A15Q8N5U1 240 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 ZDHHC22Q8N966 263 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 DTX3Q8N9I9 347 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 ZNF565Q8N9K5 539 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 PXT1Q8NFP0 134 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 OR13D1Q8NGV5 346 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 FBLIM1Q8WUP2 373 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 TNFAIP8L1Q8WVP5 186 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 DYRK2Q92630 601 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 RFT1Q96AA3 541 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 ZNF48Q96MX3 618 aaPredicted RBP3.59□□□□□ -1.83
SNX1-205ENST00000559339 ZNF714Q96N38 554 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 SPACA5Q96QH8 159 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 NR1H4Q96RI1 486 aaPredicted RBP3.59□□□□□ -1.83
SNX1-205ENST00000559339 CDCA4Q9BXL8 241 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 ANKRD60Q9BZ19 345 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 BARHL1Q9BZE3 327 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 CCDC90BQ9GZT6 254 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 CHST6Q9GZX3 395 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 METTL9Q9H1A3 318 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 GAL3ST2Q9H3Q3 398 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 PRDM13Q9H4Q3 707 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 Q9H521 79 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 TCF7L1Q9HCS4 588 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 HMG20AQ9NP66 347 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 ESM1Q9NQ30 184 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 TNFRSF19Q9NS68 423 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 C19orf12Q9NSK7 152 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 TAS2R4Q9NYW5 299 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 NKX1-2Q9UD57 310 aaPredicted RBP3.59□□□□□ -1.83
SNX1-205ENST00000559339 BLOC1S6Q9UL45 172 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 LINC00312Q9Y6C7 94 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 ARHGAP32A7KAX9 2087 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 DOCK11Q5JSL3 2073 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 IGKV1-12A0A0C4DH73 117 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 A0A0G2JK05 382 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 A0A0U1RQK1 487 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 MDFIC2A0A1B0GVS7 189 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 MEGF11A6BM72 1044 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 FAM181BA6NEQ2 426 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 C17orf98A8MV24 154 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 F8VVB4 439 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 F8VWA3 439 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 RNASEK-C17orf49H0YIS7 233 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 SIRPB1O00241 398 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 HSPB6O14558 160 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 PSPNO60542 156 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 ZNF737O75373 536 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 OR7C1O76099 320 aaPredicted RBP3.58□□□□□ -1.84
SNX1-205ENST00000559339 HTR3BO95264 441 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 OR2H2O95918 312 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 IGKV1D-12P01611 117 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 MAS1P04201 325 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 ARG1P05089 322 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 CSN2P05814 226 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 CD1AP06126 327 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 CDK1P06493 297 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 MELTFP08582 738 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 HSMCR30P0CW71 290 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 ZNF728P0DKX0 622 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 HKR1P10072 659 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 CALCBP10092 127 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 GTF2F2P13984 249 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 CCL3L1P16619 93 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 FSTP19883 344 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 PSMA1P25786 263 aaKnown RBP3.58□□□□□ -1.84
SNX1-205ENST00000559339 ERP29P30040 261 aaKnown RBP3.58□□□□□ -1.84
SNX1-205ENST00000559339 TGFBR2P37173 567 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 RANBP1P43487 201 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 IER3P46695 156 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 ARHGDIBP52566 201 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 P2RX3P56373 397 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 AESQ08117 197 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 DYNC1I2Q13409 638 aaKnown RBP3.58□□□□□ -1.84
SNX1-205ENST00000559339 GPR50Q13585 617 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 DOC2BQ14184 412 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 SPHARQ15513 63 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 KRBOX4Q5JUW0 171 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 RNLSQ5VYX0 342 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 DMKNQ6E0U4 476 aaPredicted RBP3.58□□□□□ -1.84
SNX1-205ENST00000559339 XAF1Q6GPH4 301 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 ELP2Q6IA86 826 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 OR52W1Q6IF63 320 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 ZNF529Q6P280 563 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms