RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 HLA-DQB1P01920 261 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 HIST1H1DP16402 221 aaKnown RBP15.14■□□□□ 0.01
CLPX-203ENST00000558958 FUT3P21217 361 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 PRDX2P32119 198 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 CEBPDP49716 269 aaPredicted RBP15.14■□□□□ 0.01
CLPX-203ENST00000558958 IL18Q14116 193 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 STUMQ69YW2 141 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 Q6ZTK2 550 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 RTN4RL2Q86UN3 420 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 DEFB108BQ8NET1 73 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 OR4M2Q8NGB6 313 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 ANGPTL6Q8NI99 470 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 NEDD4LQ96PU5 975 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 SPACA1Q9HBV2 294 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 RCC2Q9P258 522 aaKnown RBP15.14■□□□□ 0.01
CLPX-203ENST00000558958 RABL2AQ9UBK7 228 aaPredicted RBP15.14■□□□□ 0.01
CLPX-203ENST00000558958 ZNF222Q9UK12 451 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 HSF4Q9ULV5 492 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 RABL2BQ9UNT1 228 aa15.14■□□□□ 0.01
CLPX-203ENST00000558958 TRAV24A0A0B4J272 114 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 ZNF44P15621 663 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 PTBP1P26599 531 aaKnown RBP eCLIP15.13■□□□□ 0.011e-8■■■■■ 46.9
CLPX-203ENST00000558958 TMEM33P57088 247 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 BTG1P62324 171 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 ZMYND11Q15326 602 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 ZNF79Q15937 498 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 ZNF260Q3ZCT1 412 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 CDNFQ49AH0 187 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 NKAPLQ5M9Q1 402 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 ATAD3CQ5T2N8 411 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 PYHIN1Q6K0P9 492 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 C6orf201Q7Z4U5 140 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 CD177Q8N6Q3 437 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 CYYR1Q96J86 154 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 ABHD1Q96SE0 405 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 PECRQ9BY49 303 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 AUNIPQ9H7T9 357 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 ZMAT3Q9HA38 289 aaKnown RBP15.13■□□□□ 0.01
CLPX-203ENST00000558958 PLEKHJ1Q9NW61 149 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 KCNK7Q9Y2U2 307 aa15.13■□□□□ 0.01
CLPX-203ENST00000558958 MFNGO00587 321 aa15.12■□□□□ 0.01
CLPX-203ENST00000558958 TFF1P04155 84 aa15.12■□□□□ 0.01
CLPX-203ENST00000558958 GNB3P16520 340 aa15.12■□□□□ 0.01
CLPX-203ENST00000558958 AMY2BP19961 511 aa15.12■□□□□ 0.01
CLPX-203ENST00000558958 LMO1P25800 156 aa15.12■□□□□ 0.01
CLPX-203ENST00000558958 ATP5J2P56134 94 aa15.12■□□□□ 0.01
CLPX-203ENST00000558958 PEG10Q86TG7 708 aaKnown RBP15.12■□□□□ 0.01
CLPX-203ENST00000558958 GSX2Q9BZM3 304 aa15.12■□□□□ 0.01
CLPX-203ENST00000558958 BARX1Q9HBU1 254 aaPredicted RBP15.12■□□□□ 0.01
CLPX-203ENST00000558958 TMEM165Q9HC07 324 aa15.12■□□□□ 0.01
CLPX-203ENST00000558958 MYOZ1Q9NP98 299 aaPredicted RBP15.12■□□□□ 0.01
CLPX-203ENST00000558958 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLPX-203ENST00000558958 EDARQ9UNE0 448 aa15.12■□□□□ 0.01
CLPX-203ENST00000558958 SIRPB1O00241 398 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 SLC33A1O00400 549 aaPredicted RBP15.11■□□□□ 0.01
CLPX-203ENST00000558958 TNFRSF13BO14836 293 aaPredicted RBP15.11■□□□□ 0.01
CLPX-203ENST00000558958 SSX4O60224 188 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 IGHV2-70P01814 119 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 GYPAP02724 150 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 MELTFP08582 738 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 GSTP1P09211 210 aaKnown RBP15.11■□□□□ 0.01
CLPX-203ENST00000558958 GABRA2P47869 451 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 ARL6IP1Q15041 203 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 ATPAF1Q5TC12 328 aaPredicted RBP15.11■□□□□ 0.01
CLPX-203ENST00000558958 BRICD5Q6PL45 260 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 SNX29P2Q8IUI4 249 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 SUMF2Q8NBJ7 301 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 C15orf40Q8WUR7 153 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 ST8SIA4Q92187 359 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 SDSLQ96GA7 329 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 TIMD4Q96H15 378 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 SULT4A1Q9BR01 284 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 FAAP24Q9BTP7 215 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 WDR12Q9GZL7 423 aaKnown RBP15.11■□□□□ 0.01
CLPX-203ENST00000558958 METRNQ9UJH8 293 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 ELF5Q9UKW6 265 aaPredicted RBP15.11■□□□□ 0.01
CLPX-203ENST00000558958 HECTD1Q9ULT8 2610 aa15.11■□□□□ 0.01
CLPX-203ENST00000558958 UNC79Q9P2D8 2635 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 TMEM235A6NFC5 223 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 PPIHO43447 177 aaKnown RBP15.1■□□□□ 0.01
CLPX-203ENST00000558958 GLAP06280 429 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 PTHLHP12272 177 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 PITPNAQ00169 270 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 COL10A1Q03692 680 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 ZNF846Q147U1 533 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 KCNJ8Q15842 424 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 OLFML2AQ68BL7 652 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 ZNF788Q6ZQV5 615 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 ZNF525Q8N782 197 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 RAB1CQ92928 201 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 DPCDQ9BVM2 203 aaPredicted RBP15.1■□□□□ 0.01
CLPX-203ENST00000558958 SRRQ9GZT4 340 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 DNTTIP1Q9H147 329 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 POLQO75417 2590 aa15.1■□□□□ 0.01
CLPX-203ENST00000558958 SERPINE3A8MV23 424 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 MCRIP1C9JLW8 97 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 CTDSPLO15194 276 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 PSPNO60542 156 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 ZNF737O75373 536 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 MDH2P40926 338 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms