RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 KPNB1Q14974 876 aaKnown RBP12.5□□□□□ -0.41
TPM1-211ENST00000558314 OXLD1Q5BKU9 147 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 RNF144BQ7Z419 303 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 ABHD12Q8N2K0 398 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 DNAAF1Q8NEP3 725 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 SGCDQ92629 289 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 C10orf35Q96D05 121 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 FRRS1LQ9P0K9 344 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 PCDHGB5Q9Y5G0 923 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 TRGV10A0A0A0MS01 117 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 SLC16A6O15403 523 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 OR2H2O95918 312 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 HCKP08631 526 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 CDK2P24941 298 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 HTR1DP28221 377 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 NANOS3P60323 173 aaKnown RBP12.49□□□□□ -0.41
TPM1-211ENST00000558314 EMX1Q04741 257 aaPredicted RBP12.49□□□□□ -0.41
TPM1-211ENST00000558314 AESQ08117 197 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 PDZK1IP1Q13113 114 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 RBM39Q14498 530 aaKnown RBP12.49□□□□□ -0.41
TPM1-211ENST00000558314 SPIN3Q5JUX0 258 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 SAMD5Q5TGI4 173 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 MINOS1Q5TGZ0 78 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 OR4F17Q8NGA8 305 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 OR51A4Q8NGJ6 313 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 C4orf36Q96KX1 117 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 OR4F4Q96R69 305 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 NR1H4Q96RI1 486 aaPredicted RBP12.49□□□□□ -0.41
TPM1-211ENST00000558314 GAL3ST2Q9H3Q3 398 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 HMG20AQ9NP66 347 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 HHLA2Q9UM44 414 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 MINOS1-NBL1R4GNA1 71 aa12.49□□□□□ -0.41
TPM1-211ENST00000558314 IGKV1-12A0A0C4DH73 117 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 SH2D7A6NKC9 451 aaPredicted RBP12.48□□□□□ -0.41
TPM1-211ENST00000558314 HSPB6O14558 160 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 TOR1AO14656 332 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 EI24O14681 340 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 IGKV1D-12P01611 117 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 ALDOBP05062 364 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 TMEM225BP0DP42 221 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 GLIPR1P48060 266 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 ISL1P61371 349 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 IL18R1Q13478 541 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 ATXN7L3Q14CW9 347 aaPredicted RBP12.48□□□□□ -0.41
TPM1-211ENST00000558314 ZNF146Q15072 292 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 KHDC1LQ5JSQ8 128 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 C9orf152Q5JTZ5 239 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 LPCAT4Q643R3 524 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 ZBTB49Q6ZSB9 765 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 UTS2BQ765I0 119 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 NDUFA11Q86Y39 141 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 Q8N2B8 174 aa12.48□□□□□ -0.41
TPM1-211ENST00000558314 RNF166Q96A37 237 aaPredicted RBP12.48□□□□□ -0.41
TPM1-211ENST00000558314 UBE2J1Q9Y385 318 aaPredicted RBP12.48□□□□□ -0.41
TPM1-211ENST00000558314 PRKDCP78527 4128 aaKnown RBP12.47□□□□□ -0.41
TPM1-211ENST00000558314 FUOMA2VDF0 154 aa12.47□□□□□ -0.41
TPM1-211ENST00000558314 XPNPEP2O43895 674 aa12.47□□□□□ -0.41
TPM1-211ENST00000558314 NFYBP25208 207 aa12.47□□□□□ -0.41
TPM1-211ENST00000558314 BRS3P32247 399 aa12.47□□□□□ -0.41
TPM1-211ENST00000558314 GDNFP39905 211 aa12.47□□□□□ -0.41
TPM1-211ENST00000558314 CCDC121Q6ZUS5 278 aa12.47□□□□□ -0.41
TPM1-211ENST00000558314 KCTD20Q7Z5Y7 419 aa12.47□□□□□ -0.41
TPM1-211ENST00000558314 CENPVQ7Z7K6 275 aaPredicted RBP12.47□□□□□ -0.41
TPM1-211ENST00000558314 LHFPL3Q86UP9 236 aa12.47□□□□□ -0.41
TPM1-211ENST00000558314 OR5AU1Q8NGC0 362 aa12.47□□□□□ -0.41
TPM1-211ENST00000558314 OR4P4Q8NGL7 312 aa12.47□□□□□ -0.41
TPM1-211ENST00000558314 MRAPQ8TCY5 172 aa12.47□□□□□ -0.41
TPM1-211ENST00000558314 TRUB1Q8WWH5 349 aaKnown RBP12.47□□□□□ -0.41
TPM1-211ENST00000558314 SPSB1Q96BD6 273 aa12.47□□□□□ -0.41
TPM1-211ENST00000558314 DPM3Q9P2X0 92 aa12.47□□□□□ -0.41
TPM1-211ENST00000558314 PLXNB1O43157 2135 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 SNTNA6NMZ2 147 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 DEGS1O15121 323 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 PIN1P1O15428 100 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 IGHV3-7P01780 117 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 LPLP06858 475 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 PF4V1P10720 104 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 ERP29P30040 261 aaKnown RBP12.46□□□□□ -0.41
TPM1-211ENST00000558314 OR3A4PP47883 348 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 DYNLT3P51808 116 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 ARHGDIBP52566 201 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 ALKBH1Q13686 389 aaKnown RBP12.46□□□□□ -0.41
TPM1-211ENST00000558314 LTC4SQ16873 150 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 ABCA11PQ4W5N1 156 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 KRBOX4Q5JUW0 171 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 MEDAGQ5VYS4 303 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 OR52W1Q6IF63 320 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 SATL1Q86VE3 508 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 ACBD7Q8N6N7 88 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 OR4D6Q8NGJ1 314 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 ZNF596Q8TC21 504 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 TSEN15Q8WW01 171 aaKnown RBP12.46□□□□□ -0.41
TPM1-211ENST00000558314 LGALS12Q96DT0 336 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 PELI1Q96FA3 418 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 MRPL48Q96GC5 212 aaKnown RBP12.46□□□□□ -0.41
TPM1-211ENST00000558314 HRASLS5Q96KN8 279 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 MBOAT4Q96T53 435 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 ALG8Q9BVK2 526 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 ZCCHC4Q9H5U6 513 aa12.46□□□□□ -0.41
TPM1-211ENST00000558314 AMBNQ9NP70 447 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms