RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 C22orf42Q6IC83 251 aa11.84□□□□□ -0.51
USP3-205ENST00000557884 C17orf107Q6ZR85 190 aa11.84□□□□□ -0.51
USP3-205ENST00000557884 LYPD6Q86Y78 171 aa11.84□□□□□ -0.51
USP3-205ENST00000557884 CDH26Q8IXH8 852 aa11.84□□□□□ -0.51
USP3-205ENST00000557884 LY6G5BQ8NDX9 201 aa11.84□□□□□ -0.51
USP3-205ENST00000557884 RHOFQ9HBH0 211 aa11.84□□□□□ -0.51
USP3-205ENST00000557884 C19orf12Q9NSK7 152 aa11.84□□□□□ -0.51
USP3-205ENST00000557884 AK6Q9Y3D8 172 aaKnown RBP11.84□□□□□ -0.51
USP3-205ENST00000557884 TRDV1A0A1B0GX56 115 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 MEX3AA1L020 520 aaKnown RBP11.83□□□□□ -0.52
USP3-205ENST00000557884 DEGS1O15121 323 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 PSPNO60542 156 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 CSTBP04080 98 aaKnown RBP11.83□□□□□ -0.52
USP3-205ENST00000557884 BMXP51813 675 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 GRK1Q15835 563 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 Q6P435 159 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 CD200R1LQ6Q8B3 271 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 METAP1DQ6UB28 335 aaPredicted RBP11.83□□□□□ -0.52
USP3-205ENST00000557884 OSR2Q8N2R0 312 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 SNX22Q96L94 193 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 GFI1Q99684 422 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 UQCC2Q9BRT2 126 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 PCGF1Q9BSM1 259 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 FAM234AQ9H0X4 552 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 OR51E2Q9H255 320 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 VCX3AQ9NNX9 186 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 IL36GQ9NZH8 169 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 ZNF581Q9P0T4 197 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 JMJD1CQ15652 2540 aa11.83□□□□□ -0.52
USP3-205ENST00000557884 TRBV23-1A0A0A0MS06 115 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 HSPB6O14558 160 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 TOX4O94842 621 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 LIPFP07098 398 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 FAM157CP0CG43 387 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 OR3A1P47881 315 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 EDDM3BP56851 147 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 RPL31P62899 125 aaKnown RBP11.82□□□□□ -0.52
USP3-205ENST00000557884 PRB3Q04118 309 aaPredicted RBP11.82□□□□□ -0.52
USP3-205ENST00000557884 IL13RA2Q14627 380 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 C11orf91Q3C1V1 193 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 METTL11BQ5VVY1 283 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 GDPD3Q7L5L3 318 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 OR8H2Q8N162 312 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 TPRX1Q8N7U7 411 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 Q8NFD4 153 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 OR4S1Q8NGB4 309 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 NANPQ8TBE9 248 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 TBC1D15Q8TC07 691 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 FAM46BQ96A09 425 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 FOXRED1Q96CU9 486 aaPredicted RBP11.82□□□□□ -0.52
USP3-205ENST00000557884 C1orf147Q96MC9 270 aaPredicted RBP11.82□□□□□ -0.52
USP3-205ENST00000557884 PPA2Q9H2U2 334 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 KCNK15Q9H427 330 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 BANF2Q9H503 90 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 SEBOXQ9HB31 216 aaPredicted RBP11.82□□□□□ -0.52
USP3-205ENST00000557884 ING3Q9NXR8 418 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 STUB1Q9UNE7 303 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 ST3GAL6Q9Y274 331 aa11.82□□□□□ -0.52
USP3-205ENST00000557884 A0A0G2JK05 382 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 SHISA3A0PJX4 238 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 SLC33A1O00400 549 aaPredicted RBP11.81□□□□□ -0.52
USP3-205ENST00000557884 GEMIN2O14893 280 aaKnown RBP11.81□□□□□ -0.52
USP3-205ENST00000557884 ZNF780AO75290 641 aaPredicted RBP11.81□□□□□ -0.52
USP3-205ENST00000557884 CRTAPO75718 401 aaPredicted RBP11.81□□□□□ -0.52
USP3-205ENST00000557884 SMIM18P0DKX4 95 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 IGHV4-38-2P0DP08 117 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 GTF2F2P13984 249 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 CD36P16671 472 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 GADD45AP24522 165 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 MYL9P24844 172 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 DLX1P56177 255 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 RBM11P57052 281 aaKnown RBP11.81□□□□□ -0.52
USP3-205ENST00000557884 P2RY14Q15391 338 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 KLF17Q5JT82 389 aaPredicted RBP11.81□□□□□ -0.52
USP3-205ENST00000557884 OR10K2Q6IF99 312 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 TEX29Q8N6K0 151 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 TMEM104Q8NE00 496 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 OR51T1Q8NGJ9 327 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 C8orf46Q8TAG6 207 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 WDFY2Q96P53 400 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 TBX15Q96SF7 602 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 CHCHD6Q9BRQ6 235 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 SIRPDQ9H106 197 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 PLGRKTQ9HBL7 147 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 TXNL4BQ9NX01 149 aaKnown RBP11.81□□□□□ -0.52
USP3-205ENST00000557884 SSR3Q9UNL2 185 aa11.81□□□□□ -0.52
USP3-205ENST00000557884 TRAV24A0A0B4J272 114 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 TRAV40A0A0B4J280 105 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 LOC100506127A0A0U1RQW1 187 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 SMIM30A4D0T7 59 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 SLC22A1O15245 554 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 OR7C1O76099 320 aaPredicted RBP11.8□□□□□ -0.52
USP3-205ENST00000557884 FSHBP01225 129 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 MMP9P14780 707 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 HTR2CP28335 458 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 OR10A3P58181 314 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 GPR176Q14439 515 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 ZNF273Q14593 569 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 ATXN7L3Q14CW9 347 aaPredicted RBP11.8□□□□□ -0.52
USP3-205ENST00000557884 RAB11BQ15907 218 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms