RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 RNF166Q96A37 237 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-235ENST00000557740 RFT1Q96AA3 541 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 HRASLS5Q96KN8 279 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 MBOAT4Q96T53 435 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 MYCBPQ99417 103 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-235ENST00000557740 GAL3ST2Q9H3Q3 398 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 HMG20AQ9NP66 347 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 FRRS1LQ9P0K9 344 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 GSTK1Q9Y2Q3 226 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 UBE2J1Q9Y385 318 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-235ENST00000557740 J3QLW9 94 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 OR2H2O95918 312 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 CD28P10747 220 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 ZNF19P17023 458 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 JUNBP17275 347 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-235ENST00000557740 HTR1DP28221 377 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 ERP29P30040 261 aaKnown RBP11.78□□□□□ -0.52
SHMT2-235ENST00000557740 VDAC2P45880 294 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-235ENST00000557740 CCR9P51686 369 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 ZIK1Q3SY52 487 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-235ENST00000557740 SLC25A30Q5SVS4 291 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 PRAMEF5Q5TYX0 476 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 OR52W1Q6IF63 320 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 NDUFA11Q86Y39 141 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 ACBD7Q8N6N7 88 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 OR5D18Q8NGL1 313 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 OR10AC1Q8NH08 325 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 C4orf36Q96KX1 117 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 OR5M11Q96RB7 305 aa11.78□□□□□ -0.52
SHMT2-235ENST00000557740 J3QRE1 110 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 XPNPEP2O43895 674 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 KDM4BO94953 1096 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 ZNF44P15621 663 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 ALDH3A2P51648 485 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 ARHGDIBP52566 201 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 EMX1Q04741 257 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-235ENST00000557740 BEAN1Q3B7T3 259 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 ABHD12Q8N2K0 398 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 OR4F17Q8NGA8 305 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 OR51A4Q8NGJ6 313 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 OR4P4Q8NGL7 312 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 CAPSLQ8WWF8 208 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 R3HDM4Q96D70 268 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 PELI1Q96FA3 418 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 SPACA5Q96QH8 159 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 OR4F4Q96R69 305 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 NOTCH3Q9UM47 2321 aa11.77□□□□□ -0.53
SHMT2-235ENST00000557740 PRKDCP78527 4128 aaKnown RBP11.76□□□□□ -0.53
SHMT2-235ENST00000557740 IGKV1-12A0A0C4DH73 117 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 OR4C45A6NMZ5 311 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 MMP23AO75900 390 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 IGKV1D-12P01611 117 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 MT-ND2P03891 347 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 CDK2P24941 298 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 SCN1BQ07699 218 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 ALKBH1Q13686 389 aaKnown RBP11.76□□□□□ -0.53
SHMT2-235ENST00000557740 SAMD5Q5TGI4 173 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 ZFP1Q6P2D0 407 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 RTN4RL2Q86UN3 420 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 SAXO1Q8IYX7 474 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 CHST4Q8NCG5 386 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 ZNF596Q8TC21 504 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 LGALS12Q96DT0 336 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 AKR1E2Q96JD6 320 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 CITED2Q99967 270 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-235ENST00000557740 ALG8Q9BVK2 526 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 COMMD4Q9H0A8 199 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 RHOFQ9HBH0 211 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 ING3Q9NXR8 418 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 DPM3Q9P2X0 92 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 GMPPBQ9Y5P6 360 aa11.76□□□□□ -0.53
SHMT2-235ENST00000557740 HCKP08631 526 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 BRS3P32247 399 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 PTGFRP43088 359 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 GLIPR1P48060 266 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 BLCAPP62952 87 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 BDH1Q02338 343 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 AESQ08117 197 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 GALEQ14376 348 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 KPNB1Q14974 876 aaKnown RBP11.75□□□□□ -0.53
SHMT2-235ENST00000557740 TMEM95Q3KNT9 176 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 KPRPQ5T749 579 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-235ENST00000557740 HEPN1Q6WQI6 88 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 CBR4Q8N4T8 237 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 OR4D6Q8NGJ1 314 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 TSEN15Q8WW01 171 aaKnown RBP11.75□□□□□ -0.53
SHMT2-235ENST00000557740 WNT10AQ9GZT5 417 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 MMP28Q9H239 520 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 ZCCHC4Q9H5U6 513 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 TAS2R3Q9NYW6 316 aa11.75□□□□□ -0.53
SHMT2-235ENST00000557740 EXOGQ9Y2C4 368 aaKnown RBP11.75□□□□□ -0.53
SHMT2-235ENST00000557740 ODAMA1E959 279 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 FAM172BPA6NC97 362 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 TMEM212A6NML5 194 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 FAM90A22PA8MWA6 464 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 LEUTXA8MZ59 168 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 H3BNX3 289 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 SULT1B1O43704 296 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 FADS2O95864 444 aaKnown RBP11.74□□□□□ -0.53
SHMT2-235ENST00000557740 CSN2P05814 226 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms