RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 OPA3Q9H6K4 179 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 GAR1Q9NY12 217 aaKnown RBP10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 TREM2Q9NZC2 230 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 NOSIPQ9Y314 301 aaKnown RBP10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 BRWD1Q9NSI6 2320 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 A0A087WZY1 265 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF724A8MTY0 619 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF727A8MUV8 499 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 HSD17B6O14756 317 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 PDCD6O75340 191 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 SLC34A2O95436 690 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 CD63P08962 238 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 CEBPGP53567 150 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 VAMP2P63027 116 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 MALLQ13021 153 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 RAB35Q15286 201 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 HAGHQ16775 308 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF574Q6ZN55 896 aaPredicted RBP10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF429Q86V71 674 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 MAML2Q8IZL2 1156 aaPredicted RBP10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 PFDN5Q99471 154 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 ABHD14AQ9BUJ0 271 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 DOK5Q9P104 306 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 ST3GAL6Q9Y274 331 aa10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 RANBP2P49792 3224 aaKnown RBP10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 ASCC3Q8N3C0 2202 aaKnown RBP10.24□□□□□ -0.77
VIPAS39-211ENST00000557658 IGHV3-15A0A0B4J1V0 119 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 CXorf65A6NEN9 183 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 PPYP01298 95 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 CRYGSP22914 178 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 OMGP23515 440 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 DLK1P80370 383 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 MRPS34P82930 218 aaKnown RBP10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 ELOBQ15370 118 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 FAM27BQ5VT28 67 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 TMEM211Q6ICI0 200 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF600Q6ZNG1 722 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF695Q8IW36 515 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 SUMF1Q8NBK3 374 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 CADM4Q8NFZ8 388 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 GNPNAT1Q96EK6 184 aaPredicted RBP10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 TVP23CQ96ET8 276 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 ABHD14BQ96IU4 210 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 TMEM222Q9H0R3 208 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 SIRT7Q9NRC8 400 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 LYRM2Q9NU23 88 aaPredicted RBP10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 PARPBPQ9NWS1 579 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 C19orf25Q9UFG5 118 aaPredicted RBP10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 TCFL5Q9UL49 500 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 UBE2J1Q9Y385 318 aaPredicted RBP10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 PTRH2Q9Y3E5 179 aaKnown RBP10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 LIPGQ9Y5X9 500 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 RFNGQ9Y644 331 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 IGKV1-12A0A0C4DH73 117 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 SCRG1O75711 98 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 DKK1O94907 266 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 SCAF4O95104 1147 aaKnown RBP10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 ONECUT2O95948 504 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 NRASP01111 189 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 IGKV1D-12P01611 117 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 LCATP04180 440 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 HSPB1P04792 205 aaKnown RBP10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 TCN2P20062 427 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 LTBRP36941 435 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 PYY3Q5JQD4 70 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 TMEM252Q8N6L7 170 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 NAXEQ8NCW5 288 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 Q8WTZ3 238 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 SPSB2Q99619 263 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 NIPSNAP3BQ9BS92 247 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 IL36GQ9NZH8 169 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 FOXD3Q9UJU5 478 aaPredicted RBP10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 ABCA7Q8IZY2 2146 aa10.23□□□□□ -0.77
VIPAS39-211ENST00000557658 IFITM10A6NMD0 228 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF732B4DXR9 585 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 H0YL77 283 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 SSSCA1O60232 199 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 TIAF1O95411 115 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 RGS19P49795 217 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 NOVA1P51513 510 aaKnown RBP10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 ICAM4Q14773 271 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF506Q5JVG8 444 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 DPPA2Q7Z7J5 298 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF100Q8IYN0 542 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 OR5C1Q8NGR4 320 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 TMEM171Q8WVE6 324 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 TMEM56Q96MV1 263 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 OR6C1Q96RD1 312 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 UCN2Q96RP3 112 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 PCED1AQ9H1Q7 454 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF442Q9H7R0 627 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 PLSCR2Q9NRY7 297 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 SLC7A11Q9UPY5 501 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 CHCHD2Q9Y6H1 151 aaPredicted RBP10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 WSB1Q9Y6I7 421 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 TMEM56-RWDD3S4R434 201 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 CABIN1Q9Y6J0 2220 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 CCDC85CA6NKD9 419 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 SEC14L6B5MCN3 397 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 TOX3O15405 576 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms