RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 CTF1Q16619 201 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 GPR107Q5VW38 600 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 SFXN4Q6P4A7 337 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 GLCCI1Q86VQ1 547 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 C19orf18Q8NEA5 215 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 C8orf46Q8TAG6 207 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 CCL13Q99616 98 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 TM2D1Q9BX74 207 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 TMEM59Q9BXS4 323 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 SLC25A10Q9UBX3 287 aaPredicted RBP11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 OR14J1Q9UGF5 321 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 MAB21L2Q9Y586 359 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 ETV7Q9Y603 341 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 A0A0G2JK05 382 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 A0A1W2PPH5 198 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 J3QLI3 93 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 DVL1O14640 695 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 MGST3O14880 152 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 DEGS1O15121 323 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 ENSAO43768 121 aaKnown RBP11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 ZNF737O75373 536 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 CA11O75493 328 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 CRTAPO75718 401 aaPredicted RBP11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 TK1P04183 234 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 VSIG8P0DPA2 414 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 AMY2BP19961 511 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 ERP29P30040 261 aaKnown RBP11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 RPS27AP62979 156 aaKnown RBP11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 QRFPP83859 136 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 RBM39Q14498 530 aaKnown RBP11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 LYPD2Q6UXB3 125 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 NAV3Q8IVL0 2385 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 OR8H2Q8N162 312 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 CD177Q8N6Q3 437 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 OR5T2Q8NGG2 359 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 SEH1LQ96EE3 360 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 Q96M66 194 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 TMEM160Q9NX00 188 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 ABRACLQ9P1F3 81 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 CTSZQ9UBR2 303 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 RAB22AQ9UL26 194 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 ZANQ9Y493 2812 aa11.73□□□□□ -0.53
SUPT16H-208ENST00000557652 A0A0G2JMP0 313 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 A0A0X1KG70 313 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 SMIM31A0A1B0GVY4 71 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 METTL21EPA6NDL7 271 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 KIAA1324LA8MWY0 1029 aaPredicted RBP11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 FAM157AC9JC47 383 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 LDLRAD4O15165 306 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 OR2H2O95918 312 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 ZNF44P15621 663 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 IL2RGP31785 369 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 OR10A3P58181 314 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 COL10A1Q03692 680 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 MEF2CQ06413 473 aaPredicted RBP11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 IKZF1Q13422 519 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 BLMHQ13867 455 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 ARL6IP1Q15041 203 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 Q6P435 159 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 BTNL3Q6UXE8 466 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 CLVS1Q8IUQ0 354 aaPredicted RBP11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 CIARTQ8N365 385 aaPredicted RBP11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 FAM216BQ8N7L0 139 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 ASCC1Q8N9N2 400 aaKnown RBP11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 TMEM185AQ8NFB2 350 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 OR4M2Q8NGB6 313 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 ACOT12Q8WYK0 555 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 SLC25A46Q96AG3 418 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 TMEM186Q96B77 213 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 MSI2Q96DH6 328 aaKnown RBP11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 SELENOIQ9C0D9 397 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 LIN7BQ9HAP6 207 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 RCC2Q9P258 522 aaKnown RBP11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 VPS13CQ709C8 3753 aa11.72□□□□□ -0.53
SUPT16H-208ENST00000557652 LOC105371242A0A075B767 164 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 POM121CA8CG34 1229 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 SMAD7O15105 426 aaKnown RBP11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 OR7C1O76099 320 aaPredicted RBP11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 MPIG6BO95866 241 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 PPIAL4GP0DN37 164 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 SERPINB10P48595 397 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 VBP1P61758 197 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 NCS1P62166 190 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 C2orf76Q3KRA6 126 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 HES5Q5TA89 166 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 GDPD3Q7L5L3 318 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 NR2C2APQ86WQ0 139 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 FAM89BQ8N5H3 189 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 ZNRF1Q8ND25 227 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 TMEM104Q8NE00 496 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 OR51D1Q8NGF3 324 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 OR56B1Q8NGI3 324 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 OR10K1Q8NGX5 313 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 RAB40AQ8WXH6 277 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 AP3S1Q92572 193 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 CMTM3Q96MX0 182 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 NUDT16L1Q9BRJ7 211 aaKnown RBP11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 DCTN5Q9BTE1 182 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 DCSTAMPQ9H295 470 aa11.71□□□□□ -0.53
SUPT16H-208ENST00000557652 CELSR1Q9NYQ6 3014 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms