RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PRSS45Q7RTY3 260 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 TMEM219Q86XT9 240 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 MKXQ8IYA7 352 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 CADM3Q8N126 398 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 DYNAPQ8N1N2 210 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 OR5D13Q8NGL4 314 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 OR4K13Q8NH42 304 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 FANK1Q8TC84 345 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 ST6GALNAC6Q969X2 333 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 EME1Q96AY2 570 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 CIB1Q99828 191 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 B9D2Q9BPU9 175 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 COPS4Q9BT78 406 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 DPCDQ9BVM2 203 aaPredicted RBP4.71□□□□□ -1.66
VPS33B-207ENST00000557470 DNTTIP1Q9H147 329 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 TLNRD1Q9H1K6 362 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 ANKRD19PQ9H560 264 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 INTS9Q9NV88 658 aaKnown RBP4.71□□□□□ -1.66
VPS33B-207ENST00000557470 OR6C3Q9NZP0 311 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 BIRC6Q9NR09 4857 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 RYR2Q92736 4967 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 EPPK1P58107 5090 aaKnown RBP4.7□□□□□ -1.66
VPS33B-207ENST00000557470 A0A0B4J293 547 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 A0A0G2JND7 137 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 TVP23AA6NH52 213 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 ARPC3O15145 178 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 SLC22A1O15245 554 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 OGG1O15527 345 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 AKR7A2O43488 359 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 XRCC2O43543 280 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 SELENOFO60613 162 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 CIB2O75838 187 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 NPPAP01160 153 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 HMGN1P05114 100 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 H1F0P07305 194 aaKnown RBP4.7□□□□□ -1.66
VPS33B-207ENST00000557470 ACAA1P09110 424 aaPredicted RBP4.7□□□□□ -1.66
VPS33B-207ENST00000557470 PRKACAP17612 351 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 ANXA7P20073 488 aaKnown RBP4.7□□□□□ -1.66
VPS33B-207ENST00000557470 COX7A1P24310 79 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 HOXD3P31249 432 aaPredicted RBP4.7□□□□□ -1.66
VPS33B-207ENST00000557470 PYCR1P32322 319 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 DDOSTP39656 456 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 HSPA13P48723 471 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 RAB13P51153 203 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 PRKXP51817 358 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 FAM3AP98173 230 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 COL10A1Q03692 680 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 EGFEM1PQ0D2K5 195 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 SMN1Q16637 294 aaKnown RBP4.7□□□□□ -1.66
VPS33B-207ENST00000557470 CNPY1Q3B7I2 92 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 Q3ZCU0 254 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 COQ5Q5HYK3 327 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 TCTEX1D4Q5JR98 221 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 Q6ZNX1 250 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 TMEM182Q6ZP80 229 aaPredicted RBP4.7□□□□□ -1.66
VPS33B-207ENST00000557470 ZBTB49Q6ZSB9 765 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 SLC16A9Q7RTY1 509 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 DCXRQ7Z4W1 244 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 LHFPL4Q7Z7J7 247 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 CYP4Z1Q86W10 505 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 ZDHHC21Q8IVQ6 265 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 IZUMO1Q8IYV9 350 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 ZNRF1Q8ND25 227 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 SDR9C7Q8NEX9 313 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 OR52L2PQ8NGH6 319 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 OR4C15Q8NGM1 316 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 C2CD4CQ8TF44 421 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 ZNRF4Q8WWF5 429 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 DNAJC9Q8WXX5 260 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 RPL3LQ92901 407 aaKnown RBP4.7□□□□□ -1.66
VPS33B-207ENST00000557470 RRNAD1Q96FB5 475 aaKnown RBP4.7□□□□□ -1.66
VPS33B-207ENST00000557470 MNTQ99583 582 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 IFT27Q9BW83 186 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 PAPOLGQ9BWT3 736 aaKnown RBP4.7□□□□□ -1.66
VPS33B-207ENST00000557470 FGF23Q9GZV9 251 aaPredicted RBP4.7□□□□□ -1.66
VPS33B-207ENST00000557470 OR52D1Q9H346 318 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 SRD5A3Q9H8P0 318 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 C19orf12Q9NSK7 152 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 CMTM6Q9NX76 183 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 KCNG2Q9UJ96 466 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 TCF19Q9Y242 345 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 RHBDD3Q9Y3P4 386 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 ENPP4Q9Y6X5 453 aa4.7□□□□□ -1.66
VPS33B-207ENST00000557470 DNAH9Q9NYC9 4486 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 IGKV1D-17A0A075B6S4 117 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 hCG_38984A0A1B0GV85 526 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 A6NDX4 124 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 CGB1A6NKQ9 187 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 OR2AT4A6NND4 320 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 BBIP1A8MTZ0 92 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 E9PQ18 207 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 CXCR6O00574 342 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 EDF1O60869 148 aaKnown RBP4.69□□□□□ -1.66
VPS33B-207ENST00000557470 ATP5HO75947 161 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 DIRAS1O95057 198 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 SERPINA1P01009 418 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 ANXA8P13928 327 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 ZNF823P16415 610 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 PAICSP22234 425 aaKnown RBP4.69□□□□□ -1.66
VPS33B-207ENST00000557470 SLC6A6P31641 620 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms