RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 MTFP1Q9UDX5 166 aa20■□□□□ 0.79
SIX4-203ENST00000556952 TEX15Q9BXT5 2789 aa20■□□□□ 0.79
SIX4-203ENST00000556952 ARFGEF3Q5TH69 2177 aa20■□□□□ 0.79
SIX4-203ENST00000556952 RAI1Q7Z5J4 1906 aaPredicted RBP20■□□□□ 0.79
SIX4-203ENST00000556952 ORC5O43913 435 aa20■□□□□ 0.79
SIX4-203ENST00000556952 RBBP9O75884 186 aa20■□□□□ 0.79
SIX4-203ENST00000556952 ECDO95905 644 aaPredicted RBP20■□□□□ 0.79
SIX4-203ENST00000556952 PMELP40967 661 aa20■□□□□ 0.79
SIX4-203ENST00000556952 CCL8P80075 99 aa20■□□□□ 0.79
SIX4-203ENST00000556952 GUCA2AQ02747 115 aa20■□□□□ 0.79
SIX4-203ENST00000556952 IKZF1Q13422 519 aa20■□□□□ 0.79
SIX4-203ENST00000556952 ASAH1Q13510 395 aa20■□□□□ 0.79
SIX4-203ENST00000556952 ZNF57Q68EA5 555 aaPredicted RBP20■□□□□ 0.79
SIX4-203ENST00000556952 ACP7Q6ZNF0 438 aa20■□□□□ 0.79
SIX4-203ENST00000556952 C6orf201Q7Z4U5 140 aa20■□□□□ 0.79
SIX4-203ENST00000556952 FAM90A1Q86YD7 464 aa20■□□□□ 0.79
SIX4-203ENST00000556952 OR11L1Q8NGX0 322 aa20■□□□□ 0.79
SIX4-203ENST00000556952 TAS2R8Q9NYW2 309 aa20■□□□□ 0.79
SIX4-203ENST00000556952 KLK11Q9UBX7 282 aa20■□□□□ 0.79
SIX4-203ENST00000556952 TBC1D24Q9ULP9 559 aa20■□□□□ 0.79
SIX4-203ENST00000556952 PPP1R3CQ9UQK1 317 aa20■□□□□ 0.79
SIX4-203ENST00000556952 NPTNQ9Y639 398 aa20■□□□□ 0.79
SIX4-203ENST00000556952 NAV2Q8IVL1 2488 aa19.99■□□□□ 0.79
SIX4-203ENST00000556952 GSTT2BP0CG30 244 aa19.99■□□□□ 0.79
SIX4-203ENST00000556952 AP3S2P59780 193 aa19.99■□□□□ 0.79
SIX4-203ENST00000556952 RTN4RL2Q86UN3 420 aa19.99■□□□□ 0.79
SIX4-203ENST00000556952 TOMM5Q8N4H5 51 aa19.99■□□□□ 0.79
SIX4-203ENST00000556952 HPS1Q92902 700 aa19.99■□□□□ 0.79
SIX4-203ENST00000556952 LURAP1Q96LR2 239 aa19.99■□□□□ 0.79
SIX4-203ENST00000556952 RNF7Q9UBF6 113 aa19.99■□□□□ 0.79
SIX4-203ENST00000556952 GLS2Q9UI32 602 aa19.99■□□□□ 0.79
SIX4-203ENST00000556952 ELF5Q9UKW6 265 aaPredicted RBP19.99■□□□□ 0.79
SIX4-203ENST00000556952 KNG1P01042 644 aa19.98■□□□□ 0.79
SIX4-203ENST00000556952 LHBP01229 141 aa19.98■□□□□ 0.79
SIX4-203ENST00000556952 ATAD3CQ5T2N8 411 aa19.98■□□□□ 0.79
SIX4-203ENST00000556952 TRAPPC6BQ86SZ2 158 aa19.98■□□□□ 0.79
SIX4-203ENST00000556952 DTX2Q86UW9 622 aa19.98■□□□□ 0.79
SIX4-203ENST00000556952 ZCCHC24Q8N2G6 241 aaKnown RBP19.98■□□□□ 0.79
SIX4-203ENST00000556952 GCSAMQ8N6F7 178 aa19.98■□□□□ 0.79
SIX4-203ENST00000556952 POC5Q8NA72 575 aa19.98■□□□□ 0.79
SIX4-203ENST00000556952 NUDCD2Q8WVJ2 157 aa19.98■□□□□ 0.79
SIX4-203ENST00000556952 ZNF581Q9P0T4 197 aa19.98■□□□□ 0.79
SIX4-203ENST00000556952 DYSFO75923 2080 aa19.97■□□□□ 0.79
SIX4-203ENST00000556952 WNT9BO14905 357 aa19.97■□□□□ 0.79
SIX4-203ENST00000556952 GLAP06280 429 aa19.97■□□□□ 0.79
SIX4-203ENST00000556952 DANCRP0C864 163 aa19.97■□□□□ 0.79
SIX4-203ENST00000556952 IRF2P14316 349 aa19.97■□□□□ 0.79
SIX4-203ENST00000556952 CBX5P45973 191 aa19.97■□□□□ 0.79
SIX4-203ENST00000556952 ARFRP1Q13795 201 aa19.97■□□□□ 0.79
SIX4-203ENST00000556952 OLFML2AQ68BL7 652 aa19.97■□□□□ 0.79
SIX4-203ENST00000556952 C11orf71Q6IPW1 123 aa19.97■□□□□ 0.79
SIX4-203ENST00000556952 DEDD2Q8WXF8 326 aa19.97■□□□□ 0.79
SIX4-203ENST00000556952 WDR13Q9H1Z4 485 aa19.97■□□□□ 0.79
SIX4-203ENST00000556952 ZNF107Q9UII5 783 aaPredicted RBP19.97■□□□□ 0.79
SIX4-203ENST00000556952 MAST4O15021 2626 aa19.97■□□□□ 0.79
SIX4-203ENST00000556952 LRRC30A6NM36 301 aa19.96■□□□□ 0.79
SIX4-203ENST00000556952 SH2D1BO14796 132 aa19.96■□□□□ 0.79
SIX4-203ENST00000556952 CSF1P09603 554 aa19.96■□□□□ 0.79
SIX4-203ENST00000556952 GMFBP60983 142 aa19.96■□□□□ 0.79
SIX4-203ENST00000556952 DYRK1AQ13627 763 aa19.96■□□□□ 0.79
SIX4-203ENST00000556952 PDCD1Q15116 288 aa19.96■□□□□ 0.79
SIX4-203ENST00000556952 SULT4A1Q9BR01 284 aa19.96■□□□□ 0.79
SIX4-203ENST00000556952 LIME1Q9H400 295 aa19.96■□□□□ 0.79
SIX4-203ENST00000556952 PLEKHF2Q9H8W4 249 aa19.96■□□□□ 0.79
SIX4-203ENST00000556952 ANKRD20A5PA0PJZ0 165 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 IFNL4K9M1U5 179 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 DEGS1O15121 323 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 SSX5O60225 188 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 PTTG1O95997 202 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 EGR1P18146 543 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 DUSP1P28562 367 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 RCVRNP35243 200 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 KLF9Q13886 244 aaPredicted RBP19.95■□□□□ 0.78
SIX4-203ENST00000556952 Q6P435 159 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 COX4I2Q96KJ9 171 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 C7orf50Q9BRJ6 194 aaKnown RBP19.95■□□□□ 0.78
SIX4-203ENST00000556952 FAAP24Q9BTP7 215 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 MEIS3P1A6NDR6 274 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.95■□□□□ 0.78
SIX4-203ENST00000556952 PLA2G10O15496 165 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 ZNF44P15621 663 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 MRPS15P82914 257 aaKnown RBP19.95■□□□□ 0.78
SIX4-203ENST00000556952 TRAF4Q9BUZ4 470 aaPredicted RBP19.95■□□□□ 0.78
SIX4-203ENST00000556952 SEBOXQ9HB31 216 aaPredicted RBP19.95■□□□□ 0.78
SIX4-203ENST00000556952 IFT46Q9NQC8 304 aa19.95■□□□□ 0.78
SIX4-203ENST00000556952 LINC00854A0A1B0GVQ3 168 aa19.94■□□□□ 0.78
SIX4-203ENST00000556952 MCRIP1C9JLW8 97 aa19.94■□□□□ 0.78
SIX4-203ENST00000556952 C3orf80F5H4A9 247 aa19.94■□□□□ 0.78
SIX4-203ENST00000556952 OR2H2O95918 312 aa19.94■□□□□ 0.78
SIX4-203ENST00000556952 HAND1O96004 215 aa19.94■□□□□ 0.78
SIX4-203ENST00000556952 CD8AP01732 235 aa19.94■□□□□ 0.78
SIX4-203ENST00000556952 RBM39Q14498 530 aaKnown RBP19.94■□□□□ 0.78
SIX4-203ENST00000556952 C1orf87Q8N0U7 546 aa19.94■□□□□ 0.78
SIX4-203ENST00000556952 SUMF2Q8NBJ7 301 aa19.94■□□□□ 0.78
SIX4-203ENST00000556952 MINDY2Q8NBR6 621 aa19.94■□□□□ 0.78
SIX4-203ENST00000556952 OCSTAMPQ9BR26 566 aa19.94■□□□□ 0.78
SIX4-203ENST00000556952 UBTD1Q9HAC8 227 aa19.94■□□□□ 0.78
SIX4-203ENST00000556952 NLKQ9UBE8 527 aa19.94■□□□□ 0.78
SIX4-203ENST00000556952 DNAJB11Q9UBS4 358 aa19.94■□□□□ 0.78
SIX4-203ENST00000556952 AK3Q9UIJ7 227 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms