RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 CSTBP04080 98 aaKnown RBP14.44□□□□□ -0.1
SHMT2-225ENST00000556798 ZNF44P15621 663 aa14.44□□□□□ -0.1
SHMT2-225ENST00000556798 CD36P16671 472 aa14.44□□□□□ -0.1
SHMT2-225ENST00000556798 BMXP51813 675 aa14.44□□□□□ -0.1
SHMT2-225ENST00000556798 Q6P435 159 aa14.44□□□□□ -0.1
SHMT2-225ENST00000556798 METAP1DQ6UB28 335 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-225ENST00000556798 C17orf107Q6ZR85 190 aa14.44□□□□□ -0.1
SHMT2-225ENST00000556798 OR4M1Q8NGD0 313 aa14.44□□□□□ -0.1
SHMT2-225ENST00000556798 C1orf147Q96MC9 270 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-225ENST00000556798 FAM234AQ9H0X4 552 aa14.44□□□□□ -0.1
SHMT2-225ENST00000556798 KCNK15Q9H427 330 aa14.44□□□□□ -0.1
SHMT2-225ENST00000556798 C19orf12Q9NSK7 152 aa14.44□□□□□ -0.1
SHMT2-225ENST00000556798 TXNL4BQ9NX01 149 aaKnown RBP14.44□□□□□ -0.1
SHMT2-225ENST00000556798 ZNF581Q9P0T4 197 aa14.44□□□□□ -0.1
SHMT2-225ENST00000556798 LPAR3Q9UBY5 353 aa14.44□□□□□ -0.1
SHMT2-225ENST00000556798 ZFHX3Q15911 3703 aa14.44□□□□□ -0.1
SHMT2-225ENST00000556798 KIAA2026Q5HYC2 2103 aa14.44□□□□□ -0.1
SHMT2-225ENST00000556798 A0A1W2PQ09 198 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 TRIM64CA6NLI5 447 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 PPIAL4GP0DN37 164 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 GALP22466 123 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 GADD45AP24522 165 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 MYL9P24844 172 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 SRP14P37108 136 aaKnown RBP14.43□□□□□ -0.1
SHMT2-225ENST00000556798 OR3A1P47881 315 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 EDDM3AQ14507 147 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 GRK1Q15835 563 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 FAM185AQ8N0U4 392 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 OR8H2Q8N162 312 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 OSR2Q8N2R0 312 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 LY6G5BQ8NDX9 201 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 Q8NFD4 153 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 OR4S1Q8NGB4 309 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 OR51T1Q8NGJ9 327 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 TBC1D15Q8TC07 691 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 FOXRED1Q96CU9 486 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-225ENST00000556798 SNX22Q96L94 193 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 CHCHD6Q9BRQ6 235 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 PPA2Q9H2U2 334 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 ONECUT1Q9UBC0 465 aa14.43□□□□□ -0.1
SHMT2-225ENST00000556798 NAV3Q8IVL0 2385 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 MXRA5Q9NR99 2828 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 MEX3AA1L020 520 aaKnown RBP14.42□□□□□ -0.1
SHMT2-225ENST00000556798 HSPB6O14558 160 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 DEGS1O15121 323 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 ZNF780AO75290 641 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-225ENST00000556798 HOXB4P17483 251 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-225ENST00000556798 SRD5A1P18405 259 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 RBM11P57052 281 aaKnown RBP14.42□□□□□ -0.1
SHMT2-225ENST00000556798 OR10A3P58181 314 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 ARF6P62330 175 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 IL13RA2Q14627 380 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 C11orf91Q3C1V1 193 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 C1orf100Q5SVJ3 147 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 GDPD3Q7L5L3 318 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 TMEM104Q8NE00 496 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 C8orf46Q8TAG6 207 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 FAM46BQ96A09 425 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 PCGF1Q9BSM1 259 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 BANF2Q9H503 90 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 SEBOXQ9HB31 216 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-225ENST00000556798 PLGRKTQ9HBL7 147 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 SSR3Q9UNL2 185 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 ST3GAL6Q9Y274 331 aa14.42□□□□□ -0.1
SHMT2-225ENST00000556798 C2CD3Q4AC94 2353 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 TRBV23-1A0A0A0MS06 115 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 A0A0G2JK05 382 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 LOC100506127A0A0U1RQW1 187 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 SMIM30A4D0T7 59 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 SLC33A1O00400 549 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-225ENST00000556798 GEMIN2O14893 280 aaKnown RBP14.41□□□□□ -0.1
SHMT2-225ENST00000556798 CRTAPO75718 401 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-225ENST00000556798 LIPFP07098 398 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 GTF2F2P13984 249 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 JUNBP17275 347 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-225ENST00000556798 HTR2CP28335 458 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 FGF9P31371 208 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-225ENST00000556798 EDDM3BP56851 147 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 RPL31P62899 125 aaKnown RBP14.41□□□□□ -0.1
SHMT2-225ENST00000556798 GPR176Q14439 515 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 P2RY14Q15391 338 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 METTL11BQ5VVY1 283 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 OR10K2Q6IF99 312 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 TPRX1Q8N7U7 411 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 OR6M1Q8NGM8 313 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 RNF167Q9H6Y7 350 aa14.41□□□□□ -0.1
SHMT2-225ENST00000556798 IGHV3OR16-10A0A075B7F0 116 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 TRAV1-2A0A0B4J238 106 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 TRAV24A0A0B4J272 114 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 SLC22A1O15245 554 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 OR7C1O76099 320 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-225ENST00000556798 TOX4O94842 621 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 CD37P11049 281 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 MMP9P14780 707 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 MGMTP16455 207 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 LMO1P25800 156 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 CLDN12P56749 244 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 PRB3Q04118 309 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-225ENST00000556798 ZNF273Q14593 569 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 ATXN7L3Q14CW9 347 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms