RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SRFP11831 508 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 PNLIPP16233 465 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 HNF1AP20823 631 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 ARR3P36575 388 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 MZT1Q08AG7 82 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 CLN3Q13286 438 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 ACOT6Q3I5F7 207 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 CARFQ8N187 725 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 UBALD1Q8TB05 177 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 ZNF320A2RRD8 509 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 F6UZH7 168 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 EFEMP2O95967 443 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 PPYP01298 95 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 C10orf35Q96D05 121 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 UCK1Q9HA47 277 aa13.2□□□□□ -0.3
ARHGEF40-207ENST00000556399 AQP7P3A6NL99 342 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 YIF1AO95070 293 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 DTYMKP23919 212 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 PAX6P26367 422 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 IL24Q13007 206 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 ZNF154Q13106 437 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 PRAMEF5Q5TYX0 476 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 PRAMEF6Q5VXH4 476 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 SLC35G3Q8N808 338 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 KCNIP2Q9NS61 270 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 CHST1O43916 411 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 FCARP24071 287 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 ATP6V0CP27449 155 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 SNCAP37840 140 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 ZNF90Q03938 601 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 PIGYQ3MUY2 71 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 LILRB1Q8NHL6 650 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 CACNG5Q9UF02 275 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 VWA8A3KMH1 1905 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 PTPRDP23468 1912 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 MS4A18H0YCH9 400 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 TMEM241Q24JQ0 296 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 MS4A18Q3C1V0 323 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 FAM209BQ5JX69 171 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 DHRS11Q6UWP2 260 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 ZNF383Q8NA42 475 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 ADIPOR1Q96A54 375 aa13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 THOC3Q96J01 351 aaKnown RBP13.19□□□□□ -0.3
ARHGEF40-207ENST00000556399 ACTL6BO94805 426 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 IGLV3-21P80748 117 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 LY6G6FQ5SQ64 297 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 D2HGDHQ8N465 521 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 APOBEC3DQ96AK3 386 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 TMEM68Q96MH6 324 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 RASL10BQ96S79 203 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 ELOA3CA0A087WX78 387 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 LY86O95711 162 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 ACTL6AO96019 429 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 CD46P15529 392 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 UBE2G2P60604 165 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 SMAD4Q13485 552 aaKnown RBP13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 NSUN5P2Q63ZY6 315 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 GCNT2Q8N0V5 402 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 ATP5SQ99766 215 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 CDS2O95674 445 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 GALR1P47211 349 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 PRDX4Q13162 271 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 WIPI1Q5MNZ9 446 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 LRRC75AQ8NAA5 344 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 POC1BQ8TC44 478 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 CFHR5Q9BXR6 569 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 SIT1Q9Y3P8 196 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 LOC101059948A0A1B0GTJ6 334 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 MSGN1A6NI15 193 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 YKT6O15498 198 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 NXPH1P58417 271 aa13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 ZNF816Q0VGE8 651 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 PNRC1Q12796 327 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 CARHSP1Q9Y2V2 147 aaKnown RBP13.18□□□□□ -0.3
ARHGEF40-207ENST00000556399 XKRY2A2RUG3 117 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 HSBP1L1C9JCN9 74 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 IL2RAP01589 272 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 MBPP02686 304 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 VDAC1P21796 283 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 TLE1Q04724 770 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 GAPTQ8N292 157 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 CIB3Q96Q77 187 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 V9GYS6 101 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 DOCK6Q96HP0 2047 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 TMEM14DPA8MWL7 114 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 G3V3Q6 166 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 ZNF737O75373 536 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 SLC38A11Q08AI6 406 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 UNC119Q13432 240 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 OR8G1Q15617 311 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 MPV17LQ2QL34 196 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 TGFBR3LH3BV60 316 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 KRASP01116 189 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 RAC1P63000 192 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 GUSBP11Q6P575 273 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 CADM4Q8NFZ8 388 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 REG4Q9BYZ8 158 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 MTCL1Q9Y4B5 1905 aaKnown RBP13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 OPN1MWP04001 364 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 OPN1MW2P0DN77 364 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms