RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 EGLN1Q9GZT9 426 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 RNF7Q9UBF6 113 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 RFPL4AA6NLU0 287 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 SRRM5B3KS81 715 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 RFPL4AL1F8VTS6 287 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 GABARAPH6UMI1 98 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 MFNGO00587 321 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 ORC5O43913 435 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 ZNF44P15621 663 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 CD80P33681 288 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 CFHR2P36980 270 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 CDKN1AP38936 164 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 PCGF3Q3KNV8 242 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 SMUG1Q53HV7 270 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 NHLRC3Q5JS37 347 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 TRIQKQ629K1 86 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 Q6P435 159 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 DTX2Q86UW9 622 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 DEFB108BQ8NET1 73 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 OR10Z1Q8NGY1 313 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 SMIM4Q8WVI0 70 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 FCAMRQ8WWV6 532 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 RDH5Q92781 318 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 NUDT16L1Q9BRJ7 211 aaKnown RBP8.58□□□□□ -1.04
SRP54-208ENST00000555557 HDHD3Q9BSH5 251 aaPredicted RBP8.58□□□□□ -1.04
SRP54-208ENST00000555557 PLEKHF2Q9H8W4 249 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 RHOFQ9HBH0 211 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 RBMX2Q9Y388 322 aaKnown RBP8.58□□□□□ -1.04
SRP54-208ENST00000555557 NBPF19A0A087WUL8 3843 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 TRAV24A0A0B4J272 114 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 SIRPB1O00241 398 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 RGS13O14921 159 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 DEGS1O15121 323 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 SSX5O60225 188 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 PDCD6O75340 191 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 OR2H2O95918 312 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 NAT1P18440 290 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 FUT3P21217 361 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 COL8A2P25067 703 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 PPOXP50336 477 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 ZNF146Q15072 292 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 ZNF181Q2M3W8 571 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 HACD4Q5VWC8 232 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 GVQW1Q8N7I0 195 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 OR11L1Q8NGX0 322 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 Q8TCH9 128 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 C15orf40Q8WUR7 153 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 ST8SIA4Q92187 359 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 TRIM63Q969Q1 353 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 ERGIC1Q969X5 290 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 ING3Q9NXR8 418 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 DNAJB11Q9UBS4 358 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 METRNQ9UJH8 293 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 USF3Q68DE3 2245 aa8.57□□□□□ -1.04
SRP54-208ENST00000555557 IGHV1-69-2A0A0G2JMI3 117 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 GSTZ1O43708 216 aaPredicted RBP8.56□□□□□ -1.04
SRP54-208ENST00000555557 NDUFS7O75251 213 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 HAND1O96004 215 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 MELTFP08582 738 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 GSTP1P09211 210 aaKnown RBP8.56□□□□□ -1.04
SRP54-208ENST00000555557 PSG2P11465 335 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 IRF2P14316 349 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 GDNFP39905 211 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 GNG2P59768 71 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 TLE4Q04727 773 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 ARFRP1Q13795 201 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 IL13RA2Q14627 380 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 MPV17LQ2QL34 196 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 SMIM21Q3B7S5 101 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 ZNF57Q68EA5 555 aaPredicted RBP8.56□□□□□ -1.04
SRP54-208ENST00000555557 DNM1P46Q6ZS02 220 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 TRAPPC6BQ86SZ2 158 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 IQCF2Q8IXL9 164 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 SUMF2Q8NBJ7 301 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 GPX8Q8TED1 209 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 RAB1BQ9H0U4 201 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 TMEM106BQ9NUM4 274 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 NLKQ9UBE8 527 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 RABL2AQ9UBK7 228 aaPredicted RBP8.56□□□□□ -1.04
SRP54-208ENST00000555557 ZNF230Q9UIE0 474 aaPredicted RBP8.56□□□□□ -1.04
SRP54-208ENST00000555557 AK3Q9UIJ7 227 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 TBC1D24Q9ULP9 559 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 HSF4Q9ULV5 492 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 RABL2BQ9UNT1 228 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 NPTNQ9Y639 398 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 DYSFO75923 2080 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 IGKV1D-17A0A075B6S4 117 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A10PA6NDY2 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A18PA6NE21 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A16PA6NEW6 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A20PA6NIJ5 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A8PA6NJQ4 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A7PA6NKC0 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 OR2AT4A6NND4 320 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A22PA8MWA6 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A12PA8MX19 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A5PA8MXJ8 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 FAM90A23PA8MXZ1 464 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 SH2D1BO14796 132 aa8.56□□□□□ -1.04
SRP54-208ENST00000555557 PSPNO60542 156 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms