RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TAS2R46P59540 309 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 DSTNP60981 165 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 CENPEQ02224 2701 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 C2orf54Q08AI8 447 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 DGCR6Q14129 220 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 ITPR3Q14573 2671 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 ZNF638Q14966 1978 aaKnown RBP2.04□□□□□ -2.08
SCFD1-210ENST00000553693 PSG5Q15238 335 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 RGNQ15493 299 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 ORMDL2Q53FV1 153 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 LINC00483Q53H64 154 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 OR2T5Q6IEZ7 315 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 SLC25A45Q8N413 288 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 COX18Q8N8Q8 333 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 TMEM161BQ8NDZ6 487 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 NPBQ8NG41 125 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 OR10G4Q8NGN3 311 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 OR10J6PQ8NGY7 276 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 OR2T29Q8NH02 315 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 TMEM131Q92545 1883 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 CDKL2Q92772 493 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 HAUS1Q96CS2 278 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 SGTBQ96EQ0 304 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 DUS3LQ96G46 650 aaKnown RBP2.04□□□□□ -2.08
SCFD1-210ENST00000553693 CENPNQ96H22 339 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-210ENST00000553693 TSNAXQ99598 290 aaKnown RBP2.04□□□□□ -2.08
SCFD1-210ENST00000553693 ACBD6Q9BR61 282 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 UTP23Q9BRU9 249 aaKnown RBP2.04□□□□□ -2.08
SCFD1-210ENST00000553693 NDEL1Q9GZM8 345 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 ING2Q9H160 280 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 IFI27L2Q9H2X8 130 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 CDC42EP4Q9H3Q1 356 aaKnown RBP2.04□□□□□ -2.08
SCFD1-210ENST00000553693 GOLPH3Q9H4A6 298 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 WDR55Q9H6Y2 383 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-210ENST00000553693 TREM1Q9NP99 234 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 ZMAT5Q9UDW3 170 aaKnown RBP2.04□□□□□ -2.08
SCFD1-210ENST00000553693 ZNF835Q9Y2P0 537 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 FBN3Q75N90 2809 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 MYOFQ9NZM1 2061 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 SETD2Q9BYW2 2564 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-210ENST00000553693 IGHV3-74A0A0B4J1X5 117 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 GOLGA8QA0A0J9YX86 632 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 A0A1W2PP18 115 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 VPS37CA5D8V6 355 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-210ENST00000553693 GOLGA8IPA6NC78 632 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 NCBP2LA6PVI3 153 aaKnown RBP2.03□□□□□ -2.08
SCFD1-210ENST00000553693 ZNF99A8MXY4 864 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-210ENST00000553693 K7EMT4 169 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 CETN3O15182 167 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 ENSAO43768 121 aaKnown RBP2.03□□□□□ -2.08
SCFD1-210ENST00000553693 SLC16A7O60669 478 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 UPK1BO75841 260 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 TNFSF15O95150 251 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 DEXIO95424 95 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 TTC4O95801 387 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 MRPL3P09001 348 aaKnown RBP2.03□□□□□ -2.08
SCFD1-210ENST00000553693 CD3GP09693 182 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 GIMD1P0DJR0 217 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 USF1P22415 310 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-210ENST00000553693 HTR1DP28221 377 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 PPICP45877 212 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 CD151P48509 253 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 CSNK1A1P48729 337 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 DNASE1L1P49184 302 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 ACOT2P49753 483 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 SERPINB8P50452 374 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 ERFP50548 548 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 FABP6P51161 128 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 RPS23P62266 143 aaKnown RBP2.03□□□□□ -2.08
SCFD1-210ENST00000553693 VSNL1P62760 191 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 RAP1AP62834 184 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 PAFAH1B2P68402 229 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 IRF4Q15306 451 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 DEFB116Q30KQ4 102 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 CPTPQ5TA50 214 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 TMEM215Q68D42 235 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 PLET1Q6UQ28 207 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 TPGS1Q6ZTW0 290 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 CALHM1Q8IU99 346 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 NKAIN4Q8IVV8 208 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 ZFP41Q8N8Y5 198 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 NOXO1Q8NFA2 376 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 OR10Z1Q8NGY1 313 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 OR10G6Q8NH81 332 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 OR1S1Q8NH92 325 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 LILRB4Q8NHJ6 448 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 DOK4Q8TEW6 326 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 ABHD3Q8WU67 409 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 PDCD6IPQ8WUM4 868 aaKnown RBP2.03□□□□□ -2.08
SCFD1-210ENST00000553693 TFGQ92734 400 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-210ENST00000553693 OTUB2Q96DC9 234 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 ZNF382Q96SR6 550 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 HSD17B10Q99714 261 aaKnown RBP2.03□□□□□ -2.08
SCFD1-210ENST00000553693 BBS2Q9BXC9 721 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 PRRG3Q9BZD7 231 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 ULBP2Q9BZM5 246 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 RAB1BQ9H0U4 201 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 LHX5Q9H2C1 402 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 SPNS1Q9H2V7 528 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 REEP1Q9H902 201 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms