RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 TCF7L1Q9HCS4 588 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 SIRT7Q9NRC8 400 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 TCF21O43680 179 aa18.77■□□□□ 0.6
TDP1-206ENST00000553569 PSPNO60542 156 aa18.77■□□□□ 0.6
TDP1-206ENST00000553569 ZNF44P15621 663 aa18.77■□□□□ 0.6
TDP1-206ENST00000553569 FPR2P25090 351 aa18.77■□□□□ 0.6
TDP1-206ENST00000553569 BMXP51813 675 aa18.77■□□□□ 0.6
TDP1-206ENST00000553569 DLX1P56177 255 aa18.77■□□□□ 0.6
TDP1-206ENST00000553569 PRB3Q04118 309 aaPredicted RBP18.77■□□□□ 0.6
TDP1-206ENST00000553569 PDCD1Q15116 288 aa18.77■□□□□ 0.6
TDP1-206ENST00000553569 GRK1Q15835 563 aa18.77■□□□□ 0.6
TDP1-206ENST00000553569 BRD3OSQ6XYD6 125 aa18.77■□□□□ 0.6
TDP1-206ENST00000553569 C17orf107Q6ZR85 190 aa18.77■□□□□ 0.6
TDP1-206ENST00000553569 GDPD3Q7L5L3 318 aa18.77■□□□□ 0.6
TDP1-206ENST00000553569 PDZD9Q8IXQ8 264 aa18.77■□□□□ 0.6
TDP1-206ENST00000553569 SPARTQ8N0X7 666 aa18.77■□□□□ 0.6
TDP1-206ENST00000553569 BCL6BQ8N143 479 aaPredicted RBP18.77■□□□□ 0.6
TDP1-206ENST00000553569 SEBOXQ9HB31 216 aaPredicted RBP18.77■□□□□ 0.6
TDP1-206ENST00000553569 SC5DO75845 299 aa18.76■□□□□ 0.59
TDP1-206ENST00000553569 SERPINA2P20848 420 aa18.76■□□□□ 0.59
TDP1-206ENST00000553569 GP2P55259 537 aaKnown RBP18.76■□□□□ 0.59
TDP1-206ENST00000553569 TRAM1Q15629 374 aa18.76■□□□□ 0.59
TDP1-206ENST00000553569 PIGYQ3MUY2 71 aa18.76■□□□□ 0.59
TDP1-206ENST00000553569 HSD17B12Q53GQ0 312 aa18.76■□□□□ 0.59
TDP1-206ENST00000553569 RUSC1-AS1Q66K80 236 aa18.76■□□□□ 0.59
TDP1-206ENST00000553569 ELP2Q6IA86 826 aa18.76■□□□□ 0.59
TDP1-206ENST00000553569 ASCL4Q6XD76 172 aa18.76■□□□□ 0.59
TDP1-206ENST00000553569 NKAIN3Q8N8D7 197 aa18.76■□□□□ 0.59
TDP1-206ENST00000553569 OR4S1Q8NGB4 309 aa18.76■□□□□ 0.59
TDP1-206ENST00000553569 ZNF418Q8TF45 676 aaPredicted RBP18.76■□□□□ 0.59
TDP1-206ENST00000553569 DMRTB1Q96MA1 342 aa18.76■□□□□ 0.59
TDP1-206ENST00000553569 MRPS28Q9Y2Q9 187 aaKnown RBP18.76■□□□□ 0.59
TDP1-206ENST00000553569 SOX21Q9Y651 276 aaPredicted RBP18.76■□□□□ 0.59
TDP1-206ENST00000553569 MEX3AA1L020 520 aaKnown RBP18.75■□□□□ 0.59
TDP1-206ENST00000553569 M0R1W7 72 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 CSTBP04080 98 aaKnown RBP18.75■□□□□ 0.59
TDP1-206ENST00000553569 PSMA1P25786 263 aaKnown RBP18.75■□□□□ 0.59
TDP1-206ENST00000553569 OR3A1P47881 315 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 BLMHQ13867 455 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 ZNF273Q14593 569 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 SLC22A6Q4U2R8 563 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 Q6P435 159 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 TMEM91Q6ZNR0 172 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 Q8N7P7 452 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 TPRX1Q8N7U7 411 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 OR5D13Q8NGL4 314 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 PPP1R35Q8TAP8 253 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 SUCNR1Q9BXA5 334 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 PPIL3Q9H2H8 161 aaKnown RBP18.75■□□□□ 0.59
TDP1-206ENST00000553569 PPA2Q9H2U2 334 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 SF3B6Q9Y3B4 125 aaKnown RBP18.75■□□□□ 0.59
TDP1-206ENST00000553569 LRRC42Q9Y546 428 aa18.75■□□□□ 0.59
TDP1-206ENST00000553569 CENPVL3A0A0U1RRI6 287 aa18.74■□□□□ 0.59
TDP1-206ENST00000553569 DEGS1O15121 323 aa18.74■□□□□ 0.59
TDP1-206ENST00000553569 UCHL1P09936 223 aa18.74■□□□□ 0.59
TDP1-206ENST00000553569 CCL3L1P16619 93 aa18.74■□□□□ 0.59
TDP1-206ENST00000553569 PSMB9P28065 219 aa18.74■□□□□ 0.59
TDP1-206ENST00000553569 GABRA5P31644 462 aa18.74■□□□□ 0.59
TDP1-206ENST00000553569 KLRD1Q13241 179 aa18.74■□□□□ 0.59
TDP1-206ENST00000553569 SSX1Q16384 188 aa18.74■□□□□ 0.59
TDP1-206ENST00000553569 TMEM200BQ69YZ2 307 aa18.74■□□□□ 0.59
TDP1-206ENST00000553569 AWAT2Q6E213 333 aa18.74■□□□□ 0.59
TDP1-206ENST00000553569 ZNF773Q6PK81 442 aa18.74■□□□□ 0.59
TDP1-206ENST00000553569 LRRTM1Q86UE6 522 aa18.74■□□□□ 0.59
TDP1-206ENST00000553569 IL36GQ9NZH8 169 aa18.74■□□□□ 0.59
TDP1-206ENST00000553569 DSCAML1Q8TD84 2053 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 MXRA5Q9NR99 2828 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 A0A1W2PP11 408 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 A0A1W2PPH5 198 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 HSPB6O14558 160 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 FABP5Q01469 135 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 IL13RA2Q14627 380 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 UBE2UQ5VVX9 321 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 GLIPR1L1Q6UWM5 242 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 CDH26Q8IXH8 852 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 OSR2Q8N2R0 312 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 SIGLECL1Q8N7X8 197 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 OR4D6Q8NGJ1 314 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 OR51T1Q8NGJ9 327 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 PHYHIPQ92561 330 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 SLITRK2Q9H156 845 aa18.73■□□□□ 0.59
TDP1-206ENST00000553569 IGHV1-69DA0A0B4J2H0 117 aa18.72■□□□□ 0.59
TDP1-206ENST00000553569 A0A0G2JK05 382 aa18.72■□□□□ 0.59
TDP1-206ENST00000553569 MEGF11A6BM72 1044 aa18.72■□□□□ 0.59
TDP1-206ENST00000553569 SLC33A1O00400 549 aaPredicted RBP18.72■□□□□ 0.59
TDP1-206ENST00000553569 MGST3O14880 152 aa18.72■□□□□ 0.59
TDP1-206ENST00000553569 IGHV1-69P01742 117 aa18.72■□□□□ 0.59
TDP1-206ENST00000553569 SRMP19623 302 aa18.72■□□□□ 0.59
TDP1-206ENST00000553569 KCTD21Q4G0X4 260 aa18.72■□□□□ 0.59
TDP1-206ENST00000553569 CHST4Q8NCG5 386 aa18.72■□□□□ 0.59
TDP1-206ENST00000553569 Q8NFD4 153 aa18.72■□□□□ 0.59
TDP1-206ENST00000553569 TBC1D15Q8TC07 691 aa18.72■□□□□ 0.59
TDP1-206ENST00000553569 FCGR1BQ92637 280 aa18.72■□□□□ 0.59
TDP1-206ENST00000553569 METTL8Q9H825 291 aaKnown RBP18.72■□□□□ 0.59
TDP1-206ENST00000553569 ING3Q9NXR8 418 aa18.72■□□□□ 0.59
TDP1-206ENST00000553569 ST3GAL6Q9Y274 331 aa18.72■□□□□ 0.59
TDP1-206ENST00000553569 MDFIC2A0A1B0GVS7 189 aa18.71■□□□□ 0.59
TDP1-206ENST00000553569 ZNF780AO75290 641 aaPredicted RBP18.71■□□□□ 0.59
TDP1-206ENST00000553569 VENTXO95231 258 aa18.71■□□□□ 0.59
TDP1-206ENST00000553569 LMO1P25800 156 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms