RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 NAT6Q93015 286 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 RPUSD4Q96CM3 377 aaKnown RBP10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 MRGPRX4Q96LA9 322 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 DKKL1Q9UK85 242 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 MMP17Q9ULZ9 603 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 TMED3Q9Y3Q3 217 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 ZNF814B7Z6K7 855 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 IGHV3-9P01782 118 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 IAPPP10997 89 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 TMEM267Q0VDI3 215 aaPredicted RBP10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 SHBQ15464 509 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 C9orf50Q5SZB4 431 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 LYPD6Q86Y78 171 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 MRPL41Q8IXM3 137 aaKnown RBP10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 CCDC54Q8NEL0 328 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 NUDT16L1Q9BRJ7 211 aaKnown RBP10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 GINS3Q9BRX5 216 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 CRISPLD2Q9H0B8 497 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 WNT16Q9UBV4 365 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 LAMP3Q9UQV4 416 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 HDGFL3Q9Y3E1 203 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 ABCA7Q8IZY2 2146 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 E9PLN8 166 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 ZFAND5O76080 213 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 NRASP01111 189 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 ERVFRD-1P60508 538 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 SLC25A26Q70HW3 274 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 OSR2Q8N2R0 312 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 TMEM252Q8N6L7 170 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 OIT3Q8WWZ8 545 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 GNPNAT1Q96EK6 184 aaPredicted RBP10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 TUBD1Q9UJT1 453 aa10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 RANBP2P49792 3224 aaKnown RBP10.1□□□□□ -0.79
PPFIA2-227ENST00000552948 DHHO43323 396 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 CHST1O43916 411 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 HIST1H2BKO60814 126 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 HIST1H2BJP06899 126 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 HIST1H2BOP23527 126 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 DDTP30046 118 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 HIST1H2BBP33778 126 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 FASLGP48023 281 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 HIST1H2BDP58876 126 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 STARD6P59095 220 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 HIST1H2BCP62807 126 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 HIST2H2BEQ16778 126 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 ZNF787Q6DD87 383 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 TMEM37Q8WXS4 190 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 HIST1H2BHQ93079 126 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 MUCL1Q96DR8 90 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 MVB12AQ96EY5 273 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 TP53RKQ96S44 253 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 HIST1H2BNQ99877 126 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 HIST1H2BMQ99879 126 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 FBLN5Q9UBX5 448 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 CLDN34H7C241 214 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 TRAF3IP2O43734 574 aaPredicted RBP10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 C5orf24Q7Z6I8 188 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 RBMXL1Q96E39 390 aaKnown RBP10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 ZNF385AQ96PM9 386 aaKnown RBP10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 CHST5Q9GZS9 411 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 KCNS2Q9ULS6 477 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 CA14Q9ULX7 337 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 IGSF23A1L1A6 192 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 TERTO14746 1132 aaKnown RBP10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 SOD3P08294 240 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 ZNF17P17021 662 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 IL15RAQ13261 267 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 SNAI3Q3KNW1 292 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 Q3ZCU0 254 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 ZNF385CQ66K41 422 aaPredicted RBP10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 UBALD1Q8TB05 177 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 NTNG2Q96CW9 530 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 MARS2Q96GW9 593 aaKnown RBP10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 UCN2Q96RP3 112 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 B3GAT1Q9P2W7 334 aa10.09□□□□□ -0.79
PPFIA2-227ENST00000552948 IGKV3D-11A0A0A0MRZ8 115 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 A0A1W2PPQ1 181 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 MPPED1O15442 326 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 EFNA2O43921 213 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 TRAPPC6AO75865 159 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 TCN2P20062 427 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 SSTP61278 116 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 IZUMO4Q1ZYL8 232 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 WDR25Q64LD2 544 aaPredicted RBP10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 ZNF774Q6NX45 483 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 TBC1D26Q86UD7 250 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 OR6X1Q8NH79 312 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 FRZBQ92765 325 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 THOC3Q96J01 351 aaKnown RBP10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 KIAA1456Q9P272 454 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 HS3ST3B1Q9Y662 390 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 LILRA5A6NI73 299 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 C5orf67F2Z3F1 127 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 TP53I11O14683 189 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 PPYP01298 95 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 B4GALT1P15291 398 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 COL13A1Q5TAT6 717 aaPredicted RBP10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 BEND4Q6ZU67 534 aa10.08□□□□□ -0.8
PPFIA2-227ENST00000552948 WDR5BQ86VZ2 330 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms