RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 MMP23AO75900 390 aa12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 JUNBP17275 347 aaPredicted RBP12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 PRKACBP22694 351 aa12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 BRS3P32247 399 aa12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 ARHGDIBP52566 201 aa12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 TMEM244Q5VVB8 128 aa12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 SAXO1Q8IYX7 474 aa12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 TPRX1Q8N7U7 411 aa12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 CREB3L1Q96BA8 519 aa12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 ADAT3Q96EY9 351 aaPredicted RBP12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 RCC1LQ96I51 464 aaKnown RBP12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 RBM14Q96PK6 669 aaKnown RBP12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 ADI1Q9BV57 179 aa12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 CHST6Q9GZX3 395 aa12.87□□□□□ -0.35
CALCOCO1-220ENST00000552282 MEX3AA1L020 520 aaKnown RBP12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 M0QZK8 103 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 KDM4BO94953 1096 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 CYB5AP00167 134 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 AMY1AP04745 511 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 AMY2AP04746 511 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 ATF1P18846 271 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 CD33P20138 364 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 BCL3P20749 454 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 GABRR1P24046 479 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 SLC35A2P78381 396 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 ZNF85Q03923 595 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 EGFEM1PQ0D2K5 195 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 PDZK1IP1Q13113 114 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 ODF4Q2M2E3 257 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 KCTD20Q7Z5Y7 419 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 ABHD12Q8N2K0 398 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 CHST4Q8NCG5 386 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 OR2G2Q8NGZ5 317 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 RFKQ969G6 155 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 TBX5Q99593 518 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 CIB1Q99828 191 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 OSBPL10Q9BXB5 764 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 GLS2Q9UI32 602 aa12.86□□□□□ -0.35
CALCOCO1-220ENST00000552282 TRGV10A0A0A0MS01 117 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 IGKV1-12A0A0C4DH73 117 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 LEUTXA8MZ59 168 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 LY6LH3BQJ8 138 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 J3QRE1 110 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 IGKV1D-12P01611 117 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 FCGR1AP12314 374 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 PRKACAP17612 351 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 FASP25445 335 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 CCR9P51686 369 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 PAX5Q02548 391 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 HLA-DRB5Q30154 266 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 ARSJQ5FYB0 599 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 SLC25A30Q5SVS4 291 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 FAM220AQ7Z4H9 259 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 OR10H4Q8NGA5 316 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 TRUB1Q8WWH5 349 aaKnown RBP12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 EME1Q96AY2 570 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 OPALINQ96PE5 141 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 OR5M11Q96RB7 305 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 NCOR1P1Q9H4R4 102 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 LINC00574Q9H8X3 128 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 EXOSC4Q9NPD3 245 aaKnown RBP12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 KIAA2026Q5HYC2 2103 aa12.85□□□□□ -0.35
CALCOCO1-220ENST00000552282 FAM90A18PA6NE21 464 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 FAM90A16PA6NEW6 464 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 FAM90A20PA6NIJ5 464 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 FAM90A9PA6NNJ1 464 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 FAM90A12PA8MX19 464 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 FAM90A5PA8MXJ8 464 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 E9PQ18 207 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 SH2D1BO14796 132 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 OR2H2O95918 312 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 FAM90A15PP0C7V4 464 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 FAM90A13PP0C7W8 464 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 FAM90A14PP0C7W9 464 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 FAM90A24PP0C7X0 464 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 PF4V1P10720 104 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 IGLL1P15814 213 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 CDK2P24941 298 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 CEACAM3P40198 252 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 MTCP1P56278 107 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 CCDC144NLQ6NUI1 221 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 OR4X2Q8NGF9 303 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 MYDGFQ969H8 173 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 SLC25A33Q9BSK2 321 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 PCDHGB5Q9Y5G0 923 aa12.84□□□□□ -0.35
CALCOCO1-220ENST00000552282 ODAMA1E959 279 aa12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 ZNF729A6NN14 1252 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 BUB1B-PAK6H3BSN5 160 aa12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 K7EIL1 84 aa12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 CGB3P0DN86 165 aa12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 CGB7P0DN87 165 aa12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 DUSP1P28562 367 aa12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 POLR2IP36954 125 aaKnown RBP12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 POU3F4P49335 361 aa12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 TPTE2P1Q5T6R2 138 aa12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 PRAMEF5Q5TYX0 476 aa12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 Q6P435 159 aa12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 TRAPPC6BQ86SZ2 158 aa12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 THNSL2Q86YJ6 484 aa12.83□□□□□ -0.36
CALCOCO1-220ENST00000552282 OSR2Q8N2R0 312 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms