RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 FAM71E2Q8N5Q1 922 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 STPG4Q8N801 248 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 ZNF439Q8NDP4 499 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 OR13A1Q8NGR1 328 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 OR9G1Q8NH87 305 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 ABHD3Q8WU67 409 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 RGP1Q92546 391 aaPredicted RBP4.9□□□□□ -1.63
VPS29-210ENST00000552130 BORCS7Q96B45 105 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 FMC1Q96HJ9 113 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 GMPPAQ96IJ6 420 aaPredicted RBP4.9□□□□□ -1.63
VPS29-210ENST00000552130 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 CHST5Q9GZS9 411 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 ZNF71Q9NQZ8 489 aaPredicted RBP4.9□□□□□ -1.63
VPS29-210ENST00000552130 SS18L2Q9UHA2 77 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 NRCAMQ92823 1304 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 TAF1LQ8IZX4 1826 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 PALLDQ8WX93 1383 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 KIAA1210Q9ULL0 1709 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 ORC5O43913 435 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 ARL6IP5O75915 188 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 BTCP35070 178 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 AKR1C3P42330 323 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 ZNF133P52736 654 aaPredicted RBP4.89□□□□□ -1.63
VPS29-210ENST00000552130 FKBP3Q00688 224 aaKnown RBP4.89□□□□□ -1.63
VPS29-210ENST00000552130 PMVKQ15126 192 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 SMIM21Q3B7S5 101 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 FAM162BQ5T6X4 162 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 MORN5Q5VZ52 161 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 SLC16A13Q7RTY0 426 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 ANGPTL5Q86XS5 388 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 ZNF567Q8N184 647 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 SLC35G3Q8N808 338 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 C11orf72Q8NBR9 251 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 ST6GALNAC3Q8NDV1 305 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 OR9I1Q8NGQ6 314 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 OR1N2Q8NGR9 330 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 OR2K2Q8NGT1 345 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 IL22RA2Q969J5 263 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 DCPSQ96C86 337 aaKnown RBP4.89□□□□□ -1.63
VPS29-210ENST00000552130 PLEKHF1Q96S99 279 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 MS4A8Q9BY19 250 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 DDX31Q9H8H2 851 aaKnown RBP4.89□□□□□ -1.63
VPS29-210ENST00000552130 GNB4Q9HAV0 340 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 LRTM1Q9HBL6 345 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 RRAGDQ9NQL2 400 aaPredicted RBP4.89□□□□□ -1.63
VPS29-210ENST00000552130 PYCARDQ9ULZ3 195 aa4.89□□□□□ -1.63
VPS29-210ENST00000552130 A0A1B0GXF2 115 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 EEF1E1-BLOC1S5C9J1V9 151 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 K7N7A8 449 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 EEF1E1O43324 174 aaKnown RBP4.88□□□□□ -1.63
VPS29-210ENST00000552130 TTRP02766 147 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 OGNP20774 298 aaKnown RBP4.88□□□□□ -1.63
VPS29-210ENST00000552130 AQP1P29972 269 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 FMO3P31513 532 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 TPI1P60174 286 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 RPS21P63220 83 aaKnown RBP4.88□□□□□ -1.63
VPS29-210ENST00000552130 GTF2BQ00403 316 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 RUNX1Q01196 453 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 INCA1Q0VD86 236 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 C1DQ13901 141 aaKnown RBP4.88□□□□□ -1.63
VPS29-210ENST00000552130 C1orf100Q5SVJ3 147 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 UNQ9370/PRO34162Q6UXP9 181 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 NOTCH2NLQ7Z3S9 236 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 ZBTB8OSQ8IWT0 167 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 ZNF614Q8N883 585 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 GPR26Q8NDV2 337 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 OR51S1Q8NGJ8 323 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 TAF15Q92804 592 aaKnown RBP eCLIP4.88□□□□□ -1.63
VPS29-210ENST00000552130 SEH1LQ96EE3 360 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 RNF185Q96GF1 192 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 ATXN7L3BQ96GX2 97 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 PYURFQ96I23 114 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 LINC00477Q96M19 166 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 OR52E6Q96RD3 313 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 C2orf88Q9BSF0 95 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 ULBP3Q9BZM4 244 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 SRMSQ9H3Y6 488 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 ZSCAN16Q9H4T2 348 aaPredicted RBP4.88□□□□□ -1.63
VPS29-210ENST00000552130 POMKQ9H5K3 350 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 SPHK2Q9NRA0 654 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 CISHQ9NSE2 258 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 ZNF629Q9UEG4 869 aaPredicted RBP4.88□□□□□ -1.63
VPS29-210ENST00000552130 LRRK1Q38SD2 2015 aa4.88□□□□□ -1.63
VPS29-210ENST00000552130 K7EQS6 105 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 SLC17A3O00476 420 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 FAAHO00519 579 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 MYL12BO14950 172 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 EDIL3O43854 480 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 NDUFS5O43920 106 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 MFSD11O43934 449 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 PDCD6O75340 191 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 SPAG7O75391 227 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 SULT1C4O75897 302 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 NTN1O95631 604 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 EPPINO95925 133 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 OR8U8P0C7N1 319 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 GABRR1P24046 479 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 S100PP25815 95 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 ERP29P30040 261 aaKnown RBP4.87□□□□□ -1.63
VPS29-210ENST00000552130 PRSS3P35030 304 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms