RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 ZC4H2Q9NQZ6 224 aa1.67□□□□□ -2.14
PTCH1-223ENST00000551623 RASL12Q9NYN1 266 aa1.67□□□□□ -2.14
PTCH1-223ENST00000551623 ACTR3BQ9P1U1 418 aa1.67□□□□□ -2.14
PTCH1-223ENST00000551623 RPS6KB2Q9UBS0 482 aa1.67□□□□□ -2.14
PTCH1-223ENST00000551623 ZNF391Q9UJN7 358 aa1.67□□□□□ -2.14
PTCH1-223ENST00000551623 SNX12Q9UMY4 172 aa1.67□□□□□ -2.14
PTCH1-223ENST00000551623 VSIG4Q9Y279 399 aa1.67□□□□□ -2.14
PTCH1-223ENST00000551623 HILPDAQ9Y5L2 63 aa1.67□□□□□ -2.14
PTCH1-223ENST00000551623 LHFPL6Q9Y693 200 aa1.67□□□□□ -2.14
PTCH1-223ENST00000551623 LINC00312Q9Y6C7 94 aa1.67□□□□□ -2.14
PTCH1-223ENST00000551623 WSB1Q9Y6I7 421 aa1.67□□□□□ -2.14
PTCH1-223ENST00000551623 SESN1Q9Y6P5 492 aa1.67□□□□□ -2.14
PTCH1-223ENST00000551623 COMMD3-BMI1R4GMX3 469 aa1.67□□□□□ -2.14
PTCH1-223ENST00000551623 PLECQ15149 4684 aaKnown RBP1.66□□□□□ -2.14
PTCH1-223ENST00000551623 A0A1W2PPI3 338 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 PRSS37A4D1T9 235 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 TRAPPC13A5PLN9 417 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 SH2D7A6NKC9 451 aaPredicted RBP1.66□□□□□ -2.14
PTCH1-223ENST00000551623 LEUTXA8MZ59 168 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 LINC01619G3V211 115 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 BLOC1S5-TXNDC5H3BN57 136 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 BUB1B-PAK6H3BSN5 160 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 K7N7A8 449 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 SLC1A7O00341 560 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 CDIPTO14735 213 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 XRCC2O43543 280 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 TPST1O60507 370 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 PLIN3O60664 434 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 PEX11AO75192 247 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 ZNF737O75373 536 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 OR7A10O76100 309 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 OR5F1O95221 314 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 KRT75O95678 551 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 MT-ND1P03886 318 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 TK1P04183 234 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 CD74P04233 296 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 HIST1H2ABP04908 130 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 LGALS1P09382 135 aaKnown RBP1.66□□□□□ -2.14
PTCH1-223ENST00000551623 FAM106CPP0CH98 169 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 CD24P25063 80 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 PHBP35232 272 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 GNALP38405 381 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 AQP2P41181 271 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 KIR2DS2P43631 304 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 PCP4P48539 62 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 SLC9A3P48764 834 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 RGS8P57771 180 aaPredicted RBP1.66□□□□□ -2.14
PTCH1-223ENST00000551623 DSTNP60981 165 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 NCALDP61601 193 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 PITPNAQ00169 270 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 GABPB1Q06547 395 aaPredicted RBP1.66□□□□□ -2.14
PTCH1-223ENST00000551623 CALCOCO2Q13137 446 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 IL13RA2Q14627 380 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 SNCBQ16143 134 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 HLA-DRB5Q30154 266 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 SNAI3Q3KNW1 292 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 SPANXN4Q5MJ08 99 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 TPTE2P1Q5T6R2 138 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 LCN1P1Q5VSP4 162 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 TMEM268Q5VZI3 342 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 OR52W1Q6IF63 320 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 C1orf94Q6P1W5 598 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 DRAM2Q6UX65 266 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 BAIAP2L2Q6UXY1 529 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 HEPN1Q6WQI6 88 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 MSANTD1Q6ZTZ1 278 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 TMPRSS11FQ6ZWK6 438 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 HIST3H2AQ7L7L0 130 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 PRSS45Q7RTY3 260 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 FAM122BQ7Z309 247 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 DPY19L4Q7Z388 723 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 PATL1Q86TB9 770 aaKnown RBP1.66□□□□□ -2.14
PTCH1-223ENST00000551623 OR8H3Q8N146 312 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 LYPD1Q8N2G4 141 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 CD177Q8N6Q3 437 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 POM121L12Q8N7R1 296 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 CCNYL1Q8N7R7 359 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 FNDC5Q8NAU1 212 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 MINDY2Q8NBR6 621 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 TMEM185AQ8NFB2 350 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 OR5T2Q8NGG2 359 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 OR8H1Q8NGG4 311 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 OR56B2PQ8NGI1 322 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 NFKBIDQ8NI38 313 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 ZNF596Q8TC21 504 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 SPRYD4Q8WW59 207 aaPredicted RBP1.66□□□□□ -2.14
PTCH1-223ENST00000551623 OR5P3Q8WZ94 311 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 HIST1H2ACQ93077 130 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 VPS33AQ96AX1 596 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 SLCO4A1Q96BD0 722 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 OR4C12Q96R67 309 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 PANX1Q96RD7 426 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 C1orf50Q9BV19 199 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 IFT27Q9BW83 186 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 POLR2J2Q9GZM3 115 aaKnown RBP1.66□□□□□ -2.14
PTCH1-223ENST00000551623 NDEL1Q9GZM8 345 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 POLR2J3Q9H1A7 115 aaKnown RBP1.66□□□□□ -2.14
PTCH1-223ENST00000551623 HRH4Q9H3N8 390 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 TMEM38AQ9H6F2 299 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 PPP1R3EQ9H7J1 279 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms