RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SLC25A19Q9HC21 320 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 IL1RAPQ9NPH3 570 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 EXD2Q9NVH0 621 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 THYN1Q9P016 225 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 SENP1Q9P0U3 644 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 ZNRD1Q9P1U0 126 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 EIF3KQ9UBQ5 218 aaKnown RBP1.84□□□□□ -2.11
CPSF6-207ENST00000551516 MARCOQ9UEW3 520 aaPredicted RBP1.84□□□□□ -2.11
CPSF6-207ENST00000551516 IL20RAQ9UHF4 553 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 MGAT4AQ9UM21 535 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 SIGLEC9Q9Y336 463 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 PLXNB1O43157 2135 aa1.84□□□□□ -2.12
CPSF6-207ENST00000551516 DOCK11Q5JSL3 2073 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 IGHV3OR16-10A0A075B7F0 116 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 IGHV3-38A0A0C4DH36 116 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF816-ZNF321PA0A0X1KG74 233 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 FAM230AA0A1W2PPH8 454 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 VGLL3A8MV65 326 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 IQCF6A8MYZ5 107 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF879B4DU55 563 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 CDC42EP2O14613 210 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 EI24O14681 340 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 AIM2O14862 343 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 BIRC5O15392 142 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 CHP2O43745 196 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 CHST1O43916 411 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 FOXH1O75593 365 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 UBL3O95164 117 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 SLC2A10O95528 541 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 SERPINE1P05121 402 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 BCHEP06276 602 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 CST2P09228 141 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 CD79AP11912 226 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF43P17038 809 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 STOMP27105 288 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 CALRP27797 417 aaKnown RBP1.83□□□□□ -2.12
CPSF6-207ENST00000551516 PRDX2P32119 198 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 GGT2P36268 569 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 HPCAL1P37235 193 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 CD200P41217 278 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 KIR2DS4P43632 304 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 RPL14P50914 215 aaKnown RBP1.83□□□□□ -2.12
CPSF6-207ENST00000551516 SLC7A2P52569 658 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 SLC18A1P54219 525 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 BIDP55957 195 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 DLX6P56179 175 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 KLF3P57682 345 aaPredicted RBP1.83□□□□□ -2.12
CPSF6-207ENST00000551516 UBE2NP61088 152 aaKnown RBP1.83□□□□□ -2.12
CPSF6-207ENST00000551516 FGF12P61328 243 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 RPS27AP62979 156 aaKnown RBP1.83□□□□□ -2.12
CPSF6-207ENST00000551516 SRPXP78539 464 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 RPL18Q07020 188 aaKnown RBP1.83□□□□□ -2.12
CPSF6-207ENST00000551516 BST1Q10588 318 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 BAMBIQ13145 260 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 IMPG1Q17R60 797 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 AGKQ53H12 422 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 VAX1Q5SQQ9 334 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 MUC21Q5SSG8 566 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 SPATA46Q5T0L3 261 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ANXA8L1Q5VT79 327 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 LIPKQ5VXJ0 399 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 FAAP20Q6NZ36 180 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 C8orf74Q6P047 294 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF613Q6PF04 617 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 C5orf46Q6UWT4 87 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 LRRN1Q6UXK5 716 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 DPY19L2P2Q6ZN68 376 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF620Q6ZNG0 422 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 GDPGP1Q6ZNW5 385 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 SLC35D2Q76EJ3 337 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 CCDC80Q76M96 950 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 C16orf62Q7Z3J2 963 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 DPPA2Q7Z7J5 298 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 NAA40Q86UY6 237 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 RANBP3LQ86VV4 465 aaPredicted RBP1.83□□□□□ -2.12
CPSF6-207ENST00000551516 MREGQ8N565 214 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 SAMD12Q8N8I0 201 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 FNDC5Q8NAU1 212 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 Q8NBF4 154 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 AQP11Q8NBQ7 271 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 BEST4Q8NFU0 473 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 OR52E2Q8NGJ4 325 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 OR52B4Q8NGK2 314 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 OR4A15Q8NGL6 344 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 OR1B1Q8NGR6 318 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 OR5J2Q8NH18 312 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 AKR7LQ8NHP1 331 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF563Q8TA94 476 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 C11orf45Q8TAV5 145 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 GIPC3Q8TF64 312 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 DNAJA4Q8WW22 397 aaPredicted RBP1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ITLN1Q8WWA0 313 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 CCL17Q92583 94 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ZHX1-C8orf76Q96EF9 292 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 PKNOX2Q96KN3 472 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 RCHY1Q96PM5 261 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 OR52E6Q96RD3 313 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 GPX7Q96SL4 187 aaPredicted RBP1.83□□□□□ -2.12
CPSF6-207ENST00000551516 NDUFAF3Q9BU61 184 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ULBP2Q9BZM5 246 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms