RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 GRK1Q15835 563 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 SPIN3Q5JUX0 258 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 SLC25A26Q70HW3 274 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 SSX6Q7RTT6 188 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 BCDIN3DQ7Z5W3 292 aaKnown RBP6.11□□□□□ -1.43
NEK3-201ENST00000550331 ZNF676Q8N7Q3 588 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 TCEANCQ8N8B7 351 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 YIPF7Q8N8F6 280 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 DNAAF1Q8NEP3 725 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 WFDC9Q8NEX5 89 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 PP6455Q8WZ26 134 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 EMG1Q92979 244 aaKnown RBP6.11□□□□□ -1.43
NEK3-201ENST00000550331 SLAMF9Q96A28 289 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 BORCS8Q96FH0 119 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 ADI1Q9BV57 179 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.11□□□□□ -1.43
NEK3-201ENST00000550331 WARS2Q9UGM6 360 aaKnown RBP6.11□□□□□ -1.43
NEK3-201ENST00000550331 ENOPH1Q9UHY7 261 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 POMPQ9Y244 141 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 HILPDAQ9Y5L2 63 aa6.11□□□□□ -1.43
NEK3-201ENST00000550331 SACSQ9NZJ4 4579 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 TRBV2A0A0J9YWF9 115 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 A0A1W2PQL4 384 aaPredicted RBP6.1□□□□□ -1.43
NEK3-201ENST00000550331 MEX3AA1L020 520 aaKnown RBP6.1□□□□□ -1.43
NEK3-201ENST00000550331 METTL15A6NJ78 407 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 G3V2T6 193 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 M0R129 80 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 CYB5AP00167 134 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 UBCP0CG48 685 aaKnown RBP6.1□□□□□ -1.43
NEK3-201ENST00000550331 GABRR1P24046 479 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 HTR1DP28221 377 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 EPHA2P29317 976 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 HTR1FP30939 366 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 ARHGDIBP52566 201 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 P2RX3P56373 397 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 ZNF91Q05481 1191 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 ZNF146Q15072 292 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 FOXB2Q5VYV0 432 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 KDM4DQ6B0I6 523 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 OR52W1Q6IF63 320 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 RTN4RL2Q86UN3 420 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 EGFL6Q8IUX8 553 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 OR5AU1Q8NGC0 362 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 OR52N4Q8NGI2 321 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 OR4P4Q8NGL7 312 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 NDNFQ8TB73 568 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 ZNF596Q8TC21 504 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 SPSB1Q96BD6 273 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 OR5M11Q96RB7 305 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 IL4I1Q96RQ9 567 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 GABARAPL1Q9H0R8 117 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 GAL3ST2Q9H3Q3 398 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 LIN7BQ9HAP6 207 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 GLS2Q9UI32 602 aa6.1□□□□□ -1.43
NEK3-201ENST00000550331 UBE2J1Q9Y385 318 aaPredicted RBP6.1□□□□□ -1.43
NEK3-201ENST00000550331 FUOMA2VDF0 154 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 MITFO75030 526 aaPredicted RBP6.09□□□□□ -1.43
NEK3-201ENST00000550331 DUS4LO95620 317 aaKnown RBP6.09□□□□□ -1.43
NEK3-201ENST00000550331 MPIG6BO95866 241 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 IGLV1-47P01700 117 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 ISG15P05161 165 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 PF4V1P10720 104 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 IGLL1P15814 213 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 BCL3P20749 454 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 CD34P28906 385 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 BRS3P32247 399 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 OR3A1P47881 315 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 ATP1B3P54709 279 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 ISL1P61371 349 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 SLC35A2P78381 396 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 TAGLNQ01995 201 aaKnown RBP6.09□□□□□ -1.43
NEK3-201ENST00000550331 BDH1Q02338 343 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 TMED1Q13445 227 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 ATP6AP1Q15904 470 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 ODF4Q2M2E3 257 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 TMEM95Q3KNT9 176 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 HEPN1Q6WQI6 88 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 LHFPL2Q6ZUX7 228 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 FAM220AQ7Z4H9 259 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 CENPVQ7Z7K6 275 aaPredicted RBP6.09□□□□□ -1.43
NEK3-201ENST00000550331 TRAPPC6BQ86SZ2 158 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 FAM58AQ8N1B3 248 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 ABHD12Q8N2K0 398 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 PRSS35Q8N3Z0 413 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 TPRX1Q8N7U7 411 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 OR10H4Q8NGA5 316 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 OR4X2Q8NGF9 303 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 CAPSLQ8WWF8 208 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 CORO2AQ92828 525 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 RFKQ969G6 155 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 CREB3L1Q96BA8 519 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 WWC2-AS2Q96NR7 200 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 TBX5Q99593 518 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 CHST6Q9GZX3 395 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 RBFOX1Q9NWB1 397 aaKnown RBP6.09□□□□□ -1.43
NEK3-201ENST00000550331 TAS2R3Q9NYW6 316 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 DPM3Q9P2X0 92 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 IL36RNQ9UBH0 155 aa6.09□□□□□ -1.43
NEK3-201ENST00000550331 A0A087X0M5 115 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 TRGV10A0A0A0MS01 117 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms