RNA–Protein interactions for RNA: ENST00000549982.5

MRPL42-206, Transcript of mitochondrial ribosomal protein L42, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MRPL42, Length 15,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-206ENST00000549982 ZNF71Q9NQZ8 489 aaPredicted RBP3.64□□□□□ -1.83
MRPL42-206ENST00000549982 MRPL22Q9NWU5 206 aaKnown RBP3.64□□□□□ -1.83
MRPL42-206ENST00000549982 J3QT63 122 aa3.64□□□□□ -1.83
MRPL42-206ENST00000549982 TNFSF12O43508 249 aa3.64□□□□□ -1.83
MRPL42-206ENST00000549982 EXOSC2Q13868 293 aaKnown RBP3.64□□□□□ -1.83
MRPL42-206ENST00000549982 SPANXN5Q5MJ07 72 aa3.64□□□□□ -1.83
MRPL42-206ENST00000549982 MDP1Q86V88 176 aa3.64□□□□□ -1.83
MRPL42-206ENST00000549982 FBXW5Q969U6 566 aa3.64□□□□□ -1.83
MRPL42-206ENST00000549982 FOXD3Q9UJU5 478 aaPredicted RBP3.64□□□□□ -1.83
MRPL42-206ENST00000549982 PPIAL4EA0A075B759 164 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 PPIAL4DF5H284 164 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 C16orf97H3BN30 126 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 NDUFA2O43678 99 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 NPIPB7O75200 414 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 SULT1A3P0DMM9 295 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 SULT1A4P0DMN0 295 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 PPIAL4FP0DN26 164 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 CD200P41217 278 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 RBMXL3Q8N7X1 1067 aaKnown RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 AKIRIN1Q9H9L7 192 aaPredicted RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 PPIAL4AQ9Y536 164 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 SOX15O60248 233 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 AGFG2O95081 481 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 PPP1R1AQ13522 171 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 ATP6V1FQ16864 119 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 SEZ6L2Q6UXD5 910 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 HIST2H3AQ71DI3 136 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 H2AFB1P0C5Y9 115 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 SLC25A4P12235 298 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 PTHLHP12272 177 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 OMGP23515 440 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 PRRX1P54821 245 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 SNAI3Q3KNW1 292 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 PXDC1Q5TGL8 231 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 KCNIP4Q6PIL6 250 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 TMEM56Q96MV1 263 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 SFXN3Q9BWM7 321 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 LYPD3O95274 346 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 HLA-DRB3P79483 266 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 GGNBP1Q5YKI7 109 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 RPUSD3Q6P087 351 aaKnown RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 SKA3Q8IX90 412 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 DOCK3Q8IZD9 2030 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 OR2G3Q8NGZ4 309 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 MAFIPQ8WZ33 124 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 PIN1P1O15428 100 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 ZNF14P17017 642 aaPredicted RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 ZNF468Q5VIY5 522 aaPredicted RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 FABP1P07148 127 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 ZNF708P17019 499 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 FAM3AP98173 230 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 HNF4GQ14541 408 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 ARV1Q9H2C2 271 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 KLK13Q9UKR3 277 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 OR2W1Q9Y3N9 320 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 DUXBA0A1W2PPF3 345 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 C1orf196B1AJZ1 125 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 TGIF1Q15583 401 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 OR8G5Q8NG78 346 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 RAB1CQ92928 201 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 HSD17B10Q99714 261 aaKnown RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 MRPL13Q9BYD1 178 aaKnown RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 GPR132Q9UNW8 380 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 RCL1Q9Y2P8 373 aaKnown RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 ADH4P08319 380 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 PI3P19957 117 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 UCP3P55916 312 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 TIMM23BQ5SRD1 257 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 ZNF808Q8N4W9 903 aaPredicted RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 OR8U1Q8NH10 309 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 MITD1Q8WV92 249 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 SLC35E1Q96K37 410 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 TIMP4Q99727 224 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 CHRDL1Q9BU40 450 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 GFOD1Q9NXC2 390 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 GBF1Q92538 1859 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 SMLR1H3BR10 107 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 PTGDSP41222 190 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 EFNB2P52799 333 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 SUCLG1P53597 346 aaKnown RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 ZNF816Q0VGE8 651 aaPredicted RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 PIGYQ3MUY2 71 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 TM2D1Q9BX74 207 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 BOLA1Q9Y3E2 137 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 CD3EP07766 207 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 TAS2R45P59539 299 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 ENDOGQ14249 297 aaKnown RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 LRRC29Q8WV35 223 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 ZNRF4Q8WWF5 429 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 TMEM68Q96MH6 324 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 NKX6-2Q9C056 277 aaPredicted RBP3.63□□□□□ -1.83
MRPL42-206ENST00000549982 HAND1O96004 215 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 TMEM123Q8N131 208 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 AQP3Q92482 292 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 SRXN1Q9BYN0 137 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 DEFA4P12838 97 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 IFITM3Q01628 133 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 UBE2V2Q15819 145 aa3.63□□□□□ -1.83
MRPL42-206ENST00000549982 POM121L2Q96KW2 1035 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms