RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 NDNFQ8TB73 568 aa13.97□□□□□ -0.17
CHMP1A-205ENST00000548650 TRUB1Q8WWH5 349 aaKnown RBP13.97□□□□□ -0.17
CHMP1A-205ENST00000548650 PYDC1Q8WXC3 89 aa13.97□□□□□ -0.17
CHMP1A-205ENST00000548650 RFT1Q96AA3 541 aa13.97□□□□□ -0.17
CHMP1A-205ENST00000548650 FGGYQ96C11 551 aa13.97□□□□□ -0.17
CHMP1A-205ENST00000548650 PELI1Q96FA3 418 aa13.97□□□□□ -0.17
CHMP1A-205ENST00000548650 COMMD4Q9H0A8 199 aa13.97□□□□□ -0.17
CHMP1A-205ENST00000548650 UBE2J1Q9Y385 318 aaPredicted RBP13.97□□□□□ -0.17
CHMP1A-205ENST00000548650 DNAH3Q8TD57 4116 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 DAPL1A0PJW8 107 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 OR4C45A6NMZ5 311 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 CIB2O75838 187 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 KDM4BO94953 1096 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 OR2H2O95918 312 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 HTR1AP08908 422 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 CCR9P51686 369 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 SNRPGP62308 76 aaKnown RBP13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 BLCAPP62952 87 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 PRAMEF5Q5TYX0 476 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 BAIAP2L2Q6UXY1 529 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 ZBTB49Q6ZSB9 765 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 KCTD20Q7Z5Y7 419 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 TRAPPC6BQ86SZ2 158 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 NDUFA11Q86Y39 141 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 OR5D18Q8NGL1 313 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 OR13C9Q8NGT0 318 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 SPACA5Q96QH8 159 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 CITED2Q99967 270 aaPredicted RBP13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 MMP28Q9H239 520 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 EXOSC4Q9NPD3 245 aaKnown RBP13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 HHLA2Q9UM44 414 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 GSTK1Q9Y2Q3 226 aa13.96□□□□□ -0.17
CHMP1A-205ENST00000548650 H3BNX3 289 aa13.95□□□□□ -0.18
CHMP1A-205ENST00000548650 MT-ND2P03891 347 aa13.95□□□□□ -0.18
CHMP1A-205ENST00000548650 HTR1DP28221 377 aa13.95□□□□□ -0.18
CHMP1A-205ENST00000548650 MEDAGQ5VYS4 303 aa13.95□□□□□ -0.18
CHMP1A-205ENST00000548650 OR13C3Q8NGS6 347 aa13.95□□□□□ -0.18
CHMP1A-205ENST00000548650 C4orf36Q96KX1 117 aa13.95□□□□□ -0.18
CHMP1A-205ENST00000548650 OR5M11Q96RB7 305 aa13.95□□□□□ -0.18
CHMP1A-205ENST00000548650 TRGV10A0A0A0MS01 117 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 PRB2P02812 416 aaPredicted RBP13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 CSN2P05814 226 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 LMO1P25800 156 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 GDNFP39905 211 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 VDAC2P45880 294 aaPredicted RBP13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 BDH1Q02338 343 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 IL18R1Q13478 541 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 FBLN7Q53RD9 439 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 HEPN1Q6WQI6 88 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 ACBD7Q8N6N7 88 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 LGALS12Q96DT0 336 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 COQ2Q96H96 371 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 GAL3ST2Q9H3Q3 398 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 GLS2Q9UI32 602 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 EXOGQ9Y2C4 368 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 ORC6Q9Y5N6 252 aa13.94□□□□□ -0.18
CHMP1A-205ENST00000548650 FAM172BPA6NC97 362 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 SH2D1BO14796 132 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 IGLV1-47P01700 117 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 ALDOBP05062 364 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 GABRB1P18505 474 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 CDK2P24941 298 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 GLIPR1P48060 266 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 ALDH3A2P51648 485 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 AESQ08117 197 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 ALKBH1Q13686 389 aaKnown RBP13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 ZIK1Q3SY52 487 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 ARSJQ5FYB0 599 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 Q6ZPA2 131 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 SAXO1Q8IYX7 474 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 ABHD12Q8N2K0 398 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 OR4F17Q8NGA8 305 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 CORO2AQ92828 525 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 R3HDM4Q96D70 268 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 OR4F4Q96R69 305 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 OCSTAMPQ9BR26 566 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 ZNF286AQ9HBT8 521 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 TAS2R3Q9NYW6 316 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 DPM3Q9P2X0 92 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 AASSQ9UDR5 926 aa13.93□□□□□ -0.18
CHMP1A-205ENST00000548650 ODAMA1E959 279 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 J3QLW9 94 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 XPNPEP2O43895 674 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 PEX14O75381 377 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 OCM2P0CE71 109 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 OCMP0CE72 109 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 ZNF44P15621 663 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 ZNF19P17023 458 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 CD34P28906 385 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 ZP1P60852 638 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 EMX1Q04741 257 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 OXLD1Q5BKU9 147 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 OR52W1Q6IF63 320 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 Q6P435 159 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 CCDC121Q6ZUS5 278 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 C16orf82Q7Z2V1 217 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 RTN4RL2Q86UN3 420 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 ZNF596Q8TC21 504 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 ALG8Q9BVK2 526 aa13.92□□□□□ -0.18
CHMP1A-205ENST00000548650 ZCCHC4Q9H5U6 513 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms