RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ERP29P30040 261 aaKnown RBP10.73□□□□□ -0.69
CPSF6-204ENST00000547486 DYNLT3P51808 116 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 SPIN3Q5JUX0 258 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 LHFPL3Q86UP9 236 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 OR5D18Q8NGL1 313 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 OR13C3Q8NGS6 347 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 OR13C9Q8NGT0 318 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 RPS4Y2Q8TD47 263 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 WIPF2Q8TF74 440 aaPredicted RBP10.73□□□□□ -0.69
CPSF6-204ENST00000547486 SPSB1Q96BD6 273 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 C4orf36Q96KX1 117 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 ZNF649Q9BS31 505 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 ABCB10Q9NRK6 738 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 HHLA2Q9UM44 414 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 MYRFQ9Y2G1 1151 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 GSTK1Q9Y2Q3 226 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 A0A0G2JK05 382 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 FAM90A22PA8MWA6 464 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 SH2D1BO14796 132 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 KDM4BO94953 1096 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 LMO1P25800 156 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 GDNFP39905 211 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 GLIPR1P48060 266 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 P2RX3P56373 397 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 SLC34A1Q06495 639 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 AESQ08117 197 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 ALKBH1Q13686 389 aaKnown RBP10.72□□□□□ -0.69
CPSF6-204ENST00000547486 UTF1Q5T230 341 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 MINOS1Q5TGZ0 78 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 PRAMEF5Q5TYX0 476 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 Q6P435 159 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 OR4P4Q8NGL7 312 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 OR5M11Q96RB7 305 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 SLC29A1Q99808 456 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 CLEC7AQ9BXN2 247 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 WNT10AQ9GZT5 417 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 AMBNQ9NP70 447 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 EXOSC4Q9NPD3 245 aaKnown RBP10.72□□□□□ -0.69
CPSF6-204ENST00000547486 UBE2J1Q9Y385 318 aaPredicted RBP10.72□□□□□ -0.69
CPSF6-204ENST00000547486 ORC6Q9Y5N6 252 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 MINOS1-NBL1R4GNA1 71 aa10.72□□□□□ -0.69
CPSF6-204ENST00000547486 ZFPL1O95159 310 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 DBTP11182 482 aaKnown RBP10.71□□□□□ -0.69
CPSF6-204ENST00000547486 CD24P25063 80 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 SCN1BQ07699 218 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 GALEQ14376 348 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 BEAN1Q3B7T3 259 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 NSUN5P1Q3KNT7 163 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 FBLN7Q53RD9 439 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 TRAPPC6BQ86SZ2 158 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 ABHD12Q8N2K0 398 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 RHOXF1Q8NHV9 184 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 NDNFQ8TB73 568 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 CORO2AQ92828 525 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 ALG8Q9BVK2 526 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 PRSS22Q9GZN4 317 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 COMMD4Q9H0A8 199 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 ZCCHC4Q9H5U6 513 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 GLS2Q9UI32 602 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 PITPNC1Q9UKF7 332 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 GMPPBQ9Y5P6 360 aa10.71□□□□□ -0.69
CPSF6-204ENST00000547486 TET2Q6N021 2002 aaPredicted RBP10.7□□□□□ -0.7
CPSF6-204ENST00000547486 FAM172BPA6NC97 362 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 ADARB2-AS1A8MUL3 147 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 F2RL2O00254 374 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 FBXO24O75426 580 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 OCM2P0CE71 109 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 OCMP0CE72 109 aaPredicted RBP10.7□□□□□ -0.7
CPSF6-204ENST00000547486 CDK2P24941 298 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 HTR1DP28221 377 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 ZP1P60852 638 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 IL18R1Q13478 541 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 CDK5R1Q15078 307 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 TMEM95Q3KNT9 176 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 SAMD5Q5TGI4 173 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 ZFP1Q6P2D0 407 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 SAXO1Q8IYX7 474 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 SYS1Q8N2H4 156 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 DTX3Q8N9I9 347 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 COQ2Q96H96 371 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 CITED2Q99967 270 aaPredicted RBP10.7□□□□□ -0.7
CPSF6-204ENST00000547486 OCSTAMPQ9BR26 566 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 MMP28Q9H239 520 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 NEK6Q9HC98 313 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 ERVK13-1Q9NX77 482 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 ING3Q9NXR8 418 aa10.7□□□□□ -0.7
CPSF6-204ENST00000547486 TRGV10A0A0A0MS01 117 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 SNTNA6NMZ2 147 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 SLC33A1O00400 549 aaPredicted RBP10.69□□□□□ -0.7
CPSF6-204ENST00000547486 DEGS1O15121 323 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 ALX3O95076 343 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 IGLV1-47P01700 117 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 PRB2P02812 416 aaPredicted RBP10.69□□□□□ -0.7
CPSF6-204ENST00000547486 TMEM225BP0DP42 221 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 ZNF44P15621 663 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 BDH1Q02338 343 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 KISS1Q15726 138 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 KPRPQ5T749 579 aaPredicted RBP10.69□□□□□ -0.7
CPSF6-204ENST00000547486 HEPN1Q6WQI6 88 aa10.69□□□□□ -0.7
CPSF6-204ENST00000547486 ZBTB49Q6ZSB9 765 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms