RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ALDOBP05062 364 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 TMEM225BP0DP42 221 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 LMO1P25800 156 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 CFPP27918 469 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 DUSP1P28562 367 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 ERP29P30040 261 aaKnown RBP12.98□□□□□ -0.33
DDX54-204ENST00000546898 IER3P46695 156 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 MTNR1BP49286 362 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 SNU13P55769 128 aaKnown RBP12.98□□□□□ -0.33
DDX54-204ENST00000546898 DLX6P56179 175 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 PRB3Q04118 309 aaPredicted RBP12.98□□□□□ -0.33
DDX54-204ENST00000546898 Q499Y3 187 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 C3orf56Q8N813 242 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 CHST4Q8NCG5 386 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 OR52N4Q8NGI2 321 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 OR51A2Q8NGJ7 313 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 NRG4Q8WWG1 115 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 DYRK2Q92630 601 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 GHSRQ92847 366 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 PGLYRP3Q96LB9 341 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 GPER1Q99527 375 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 LINC00312Q9Y6C7 94 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 A0A1W2PRD5 423 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 A0A1W2PRF3 423 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 A0A1W2PRM7 423 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 FUOMA2VDF0 154 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 SIRPB1O00241 398 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 GABRPO00591 440 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 PSPNO60542 156 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 OR2H2O95918 312 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 CD1AP06126 327 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 ZNF728P0DKX0 622 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 C21orf33P30042 268 aaPredicted RBP12.97□□□□□ -0.33
DDX54-204ENST00000546898 OR3A1P47881 315 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 BDH1Q02338 343 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 EDDM3AQ14507 147 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 RNLSQ5VYX0 342 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 ELP2Q6IA86 826 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 PNKDQ8N490 385 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 OR4S1Q8NGB4 309 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 TNFAIP8L1Q8WVP5 186 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 THRSPQ92748 146 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 ZNF714Q96N38 554 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 CHST6Q9GZX3 395 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 TMEM138Q9NPI0 162 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 CKLFQ9UBR5 152 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 ERGIC3Q9Y282 383 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 KIAA2026Q5HYC2 2103 aa12.97□□□□□ -0.33
DDX54-204ENST00000546898 BTBD17A6NE02 478 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 FAM181BA6NEQ2 426 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 GPX5O75715 221 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 IGHV4-59P01825 116 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 CRYBA1P05813 215 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 CSN2P05814 226 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 CDK1P06493 297 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 CALCBP10092 127 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 ZNF44P15621 663 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 FSTP19883 344 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 P2RX3P56373 397 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 RIPK1Q13546 671 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 C6orf141Q5SZD1 244 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 DDI2Q5TDH0 399 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 TCF23Q7RTU1 214 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 NANOGP1Q8N7R0 232 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 ZFP41Q8N8Y5 198 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 BEND2Q8NDZ0 799 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 OR13C5Q8NGS8 318 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 OR5R1Q8NH85 324 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 TNFRSF19Q9NS68 423 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 SCN3BQ9NY72 215 aa12.96□□□□□ -0.33
DDX54-204ENST00000546898 A0A1B0GUS0 222 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 H0YHG0 523 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 IGFBP3P17936 291 aaPredicted RBP12.95□□□□□ -0.34
DDX54-204ENST00000546898 MYF6P23409 242 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 BDKRB2P30411 391 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 ZNF93P35789 620 aaPredicted RBP12.95□□□□□ -0.34
DDX54-204ENST00000546898 RPS11P62280 158 aaKnown RBP eCLIP12.95□□□□□ -0.34
DDX54-204ENST00000546898 IL13RA2Q14627 380 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 Q6P435 159 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 ASCL4Q6XD76 172 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 ZNF782Q6ZMW2 699 aaPredicted RBP12.95□□□□□ -0.34
DDX54-204ENST00000546898 GDPGP1Q6ZNW5 385 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 SATL1Q86VE3 508 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 Q8NFD4 153 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 OR51T1Q8NGJ9 327 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 OR13D1Q8NGV5 346 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 MYDGFQ969H8 173 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 MND1Q9BWT6 205 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 CDCA4Q9BXL8 241 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 ANKRD60Q9BZ19 345 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 FAM192AQ9GZU8 254 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 IL36GQ9NZH8 169 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 VPREB3Q9UKI3 123 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 UBE2J1Q9Y385 318 aaPredicted RBP12.95□□□□□ -0.34
DDX54-204ENST00000546898 MMP24Q9Y5R2 645 aa12.95□□□□□ -0.34
DDX54-204ENST00000546898 POM121CA8CG34 1229 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 GPR137BO60478 399 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 NDUFA7O95182 113 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 IGHV1-8P0DP01 117 aa12.94□□□□□ -0.34
DDX54-204ENST00000546898 CELP19835 753 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms