RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 FCGR3AP08637 254 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 GSTP1P09211 210 aaKnown RBP10.19□□□□□ -0.78
CCDC38-202ENST00000546386 UBBP0CG47 229 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 CD34P28906 385 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 NRN1LQ496H8 165 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 Q6ZR03 302 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 C12orf45Q8N5I9 185 aaPredicted RBP10.19□□□□□ -0.78
CCDC38-202ENST00000546386 OR5AP2Q8NGF4 316 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 TMEM230Q96A57 120 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 RDH8Q9NYR8 311 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 Q9UFV3 132 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 C5orf51A6NDU8 294 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 CXCL2P19875 107 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 FCGR2CP31995 323 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 LY6G6FQ5SQ64 297 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 OR2Z1Q8NG97 314 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 OR6K3Q8NGY3 331 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 PRRT1Q99946 306 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 RTBDNQ9BSG5 229 aaPredicted RBP10.18□□□□□ -0.78
CCDC38-202ENST00000546386 A0A0A6YYH2 397 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 C9orf170A2RU37 121 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 A6NJ64 397 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 K7ENP7 123 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 RRP8O43159 456 aaKnown RBP10.18□□□□□ -0.78
CCDC38-202ENST00000546386 SPRY3O43610 288 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 TMEM127O75204 238 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 TRAPPC2P0DI81 140 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 TRAPPC2BP0DI82 140 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 GRK1Q15835 563 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 LTC4SQ16873 150 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 INO80CQ6PI98 192 aaPredicted RBP10.18□□□□□ -0.78
CCDC38-202ENST00000546386 HOGA1Q86XE5 327 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 WFDC8Q8IUA0 241 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 OR5L1Q8NGL2 311 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 OCSTAMPQ9BR26 566 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 TM2D1Q9BX74 207 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 ANXA10Q9UJ72 324 aa10.18□□□□□ -0.78
CCDC38-202ENST00000546386 FAM208BQ5VWN6 2430 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 IGHV3OR15-7A0A075B7D8 119 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 IGHV2OR16-5A0A0B4J2B6 119 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 TRGV8A0A0C4DH27 118 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 GRNP28799 593 aaKnown RBP10.17□□□□□ -0.78
CCDC38-202ENST00000546386 OR8G1Q15617 311 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 ANKRD55Q3KP44 614 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 C1orf185Q5T7R7 199 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 CLEC18BQ6UXF7 455 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 CLEC9AQ6UXN8 241 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 Q6ZSR3 168 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 OVCH2Q7RTZ1 564 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 MKXQ8IYA7 352 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 ZFAND1Q8TCF1 268 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 USP9XQ93008 2570 aaPredicted RBP10.17□□□□□ -0.78
CCDC38-202ENST00000546386 OR5H1A6NKK0 313 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 ZNF780AO75290 641 aaPredicted RBP10.17□□□□□ -0.78
CCDC38-202ENST00000546386 NXPH2O95156 264 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 MPC2O95563 127 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 ERP29P30040 261 aaKnown RBP10.17□□□□□ -0.78
CCDC38-202ENST00000546386 ALDH3B1P43353 468 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 SUPT4H1P63272 117 aaKnown RBP10.17□□□□□ -0.78
CCDC38-202ENST00000546386 MEF2DQ14814 521 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 SUMF2Q8NBJ7 301 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 C10orf35Q96D05 121 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 CITED4Q96RK1 184 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 FBLN5Q9UBX5 448 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 OPN4Q9UHM6 478 aa10.17□□□□□ -0.78
CCDC38-202ENST00000546386 POLQO75417 2590 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 SERPINE3A8MV23 424 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 PDCD6O75340 191 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 IGKV3-15P01624 115 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 RPA2P15927 270 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 PPP3CBP16298 524 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 FUT3P21217 361 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 HTR2BP41595 481 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 GNG3P63215 75 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 MRPL49Q13405 166 aaKnown RBP10.16□□□□□ -0.78
CCDC38-202ENST00000546386 HYLS1Q96M11 299 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 USB1Q9BQ65 265 aaKnown RBP10.16□□□□□ -0.78
CCDC38-202ENST00000546386 SLC25A21Q9BQT8 299 aaPredicted RBP10.16□□□□□ -0.78
CCDC38-202ENST00000546386 DCTN5Q9BTE1 182 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 PARP12Q9H0J9 701 aaKnown RBP10.16□□□□□ -0.78
CCDC38-202ENST00000546386 DCAF16Q9NXF7 216 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 MSRB2Q9Y3D2 182 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 USP24Q9UPU5 2620 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 TRAV24A0A0B4J272 114 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 MBD3L4A6NDZ8 208 aaPredicted RBP10.16□□□□□ -0.78
CCDC38-202ENST00000546386 MBD3L3A6NE82 208 aaPredicted RBP10.16□□□□□ -0.78
CCDC38-202ENST00000546386 MBD3L5A6NJ08 208 aaPredicted RBP10.16□□□□□ -0.78
CCDC38-202ENST00000546386 OR8H3Q8N146 312 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 FAM58AQ8N1B3 248 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 GALNT11Q8NCW6 608 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 DEFB108BQ8NET1 73 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 MBD3L2Q8NHZ7 208 aaPredicted RBP10.16□□□□□ -0.78
CCDC38-202ENST00000546386 SECTM1Q8WVN6 248 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 OR51I2Q9H344 312 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 RABL2AQ9UBK7 228 aaPredicted RBP10.16□□□□□ -0.78
CCDC38-202ENST00000546386 GHRLQ9UBU3 117 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 FBXO9Q9UK97 447 aaPredicted RBP10.16□□□□□ -0.78
CCDC38-202ENST00000546386 RABL2BQ9UNT1 228 aa10.16□□□□□ -0.78
CCDC38-202ENST00000546386 LRRK2Q5S007 2527 aa10.15□□□□□ -0.78
CCDC38-202ENST00000546386 TEX13DA0A0J9YY54 714 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms