RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 SAXO1Q8IYX7 474 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 ZSCAN4Q8NAM6 433 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-211ENST00000546304 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 CLDND2Q8NHS1 167 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 ZNF671Q8TAW3 534 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 EMG1Q92979 244 aaKnown RBP5.28□□□□□ -1.56
PRKDC-211ENST00000546304 TMIGD2Q96BF3 282 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 C12orf43Q96C57 262 aaKnown RBP5.28□□□□□ -1.56
PRKDC-211ENST00000546304 RAB39BQ96DA2 213 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 YIPF6Q96EC8 236 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 SEH1LQ96EE3 360 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 WWC2-AS2Q96NR7 200 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 UQCC2Q9BRT2 126 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 CENPOQ9BU64 300 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 FUNDC2Q9BWH2 189 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 REG4Q9BYZ8 158 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 ELL3Q9HB65 397 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-211ENST00000546304 HES4Q9HCC6 221 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 RBFOX1Q9NWB1 397 aaKnown RBP5.28□□□□□ -1.56
PRKDC-211ENST00000546304 MTCH1Q9NZJ7 389 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 NLKQ9UBE8 527 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 SCOCQ9UIL1 159 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 SSR3Q9UNL2 185 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 PPIAL4AQ9Y536 164 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 MXRA5Q9NR99 2828 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 IGKV1D-17A0A075B6S4 117 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 TRAV1-2A0A0B4J238 106 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 OR2AT4A6NND4 320 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 F5H0A9 414 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-211ENST00000546304 F8VVB4 439 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 F8VWA3 439 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 AIREO43918 545 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 GABARAPO95166 117 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 CDRT1O95170 752 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 GYPAP02724 150 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 HEXAP06865 529 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 SFTPBP07988 381 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 ACAA1P09110 424 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-211ENST00000546304 PRKACAP17612 351 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 IL2RGP31785 369 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 PTGFRP43088 359 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 NPBWR2P48146 333 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 MTNR1BP49286 362 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 BMXP51813 675 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 SNU13P55769 128 aaKnown RBP5.27□□□□□ -1.57
PRKDC-211ENST00000546304 OR10A3P58181 314 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 CD83Q01151 205 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 RSU1Q15404 277 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 DGUOKQ16854 277 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 TMEM249Q2WGJ8 235 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 SLC22A6Q4U2R8 563 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 GLT8D1Q68CQ7 371 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 TMEM200BQ69YZ2 307 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 FIP1L1Q6UN15 594 aaKnown RBP5.27□□□□□ -1.57
PRKDC-211ENST00000546304 GDPGP1Q6ZNW5 385 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 SLC16A12Q6ZSM3 486 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 LRRC28Q86X40 367 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-211ENST00000546304 LYPD6Q86Y78 171 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 CDH26Q8IXH8 852 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 FAM58AQ8N1B3 248 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 CIARTQ8N365 385 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-211ENST00000546304 FAM216BQ8N7L0 139 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 MAPK1IP1LQ8NDC0 245 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 DEFB108BQ8NET1 73 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 PXT1Q8NFP0 134 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 OR4D6Q8NGJ1 314 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 OR6M1Q8NGM8 313 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 OR51F2Q8NH61 342 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 TBC1D15Q8TC07 691 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 KCTD7Q96MP8 289 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 GFI1Q99684 422 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 TMEM246Q9BRR3 403 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 KRTAP4-5Q9BYR2 181 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 RNF167Q9H6Y7 350 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 ZNF665Q9H7R5 613 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 RHOFQ9HBH0 211 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 PLGRKTQ9HBL7 147 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 TMEM165Q9HC07 324 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 RASL12Q9NYN1 266 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 IL36GQ9NZH8 169 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 IL36RNQ9UBH0 155 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 CTSZQ9UBR2 303 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 ZNF222Q9UK12 451 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 GSTK1Q9Y2Q3 226 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 MRPS28Q9Y2Q9 187 aaKnown RBP5.27□□□□□ -1.57
PRKDC-211ENST00000546304 AK6Q9Y3D8 172 aaKnown RBP5.27□□□□□ -1.57
PRKDC-211ENST00000546304 KIAA2026Q5HYC2 2103 aa5.27□□□□□ -1.57
PRKDC-211ENST00000546304 NIPBLQ6KC79 2804 aaeCLIP5.26□□□□□ -1.571e-8■□□□□ 8.1
PRKDC-211ENST00000546304 FN1P02751 2386 aaKnown RBP5.26□□□□□ -1.57
PRKDC-211ENST00000546304 A0A1B0GW55 424 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 SMIM30A4D0T7 59 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 RFPL4AA6NLU0 287 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 A8MXK9 166 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 RFPL4AL1F8VTS6 287 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 AIPO00170 330 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 SLC17A2O00624 439 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 PDCD5O14737 125 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 SLC22A1O15245 554 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 SIGLEC5O15389 551 aa5.26□□□□□ -1.57
PRKDC-211ENST00000546304 ADAM20O43506 726 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms