RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 C9orf139Q6ZV77 190 aa15.73■□□□□ 0.11
DDX55-211ENST00000544429 UQCC2Q9BRT2 126 aa15.73■□□□□ 0.11
DDX55-211ENST00000544429 UNKLQ9H9P5 680 aaKnown RBP15.73■□□□□ 0.11
DDX55-211ENST00000544429 NUP50Q9UKX7 468 aa15.73■□□□□ 0.11
DDX55-211ENST00000544429 ATRQ13535 2644 aa15.73■□□□□ 0.11
DDX55-211ENST00000544429 M0R1W7 72 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 RGS9O75916 674 aaPredicted RBP15.72■□□□□ 0.11
DDX55-211ENST00000544429 TOX4O94842 621 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 IFNA2P01563 188 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 OR3A1P47881 315 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 RPL31P62899 125 aaKnown RBP15.72■□□□□ 0.11
DDX55-211ENST00000544429 IL13RA2Q14627 380 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 RSU1Q15404 277 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 HSD17B12Q53GQ0 312 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 METTL11BQ5VVY1 283 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 METAP1DQ6UB28 335 aaPredicted RBP15.72■□□□□ 0.11
DDX55-211ENST00000544429 C11orf42Q8N5U0 333 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 ASCC1Q8N9N2 400 aaKnown RBP15.72■□□□□ 0.11
DDX55-211ENST00000544429 CHST4Q8NCG5 386 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 OR4D6Q8NGJ1 314 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 OR5D13Q8NGL4 314 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 OR10K1Q8NGX5 313 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 FAM192AQ9GZU8 254 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 METTL9Q9H1A3 318 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 TCF7L1Q9HCS4 588 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 EXOSC4Q9NPD3 245 aaKnown RBP15.72■□□□□ 0.11
DDX55-211ENST00000544429 GLS2Q9UI32 602 aa15.72■□□□□ 0.11
DDX55-211ENST00000544429 A0A0G2JK05 382 aa15.71■□□□□ 0.11
DDX55-211ENST00000544429 CSN2P05814 226 aa15.71■□□□□ 0.11
DDX55-211ENST00000544429 GALP22466 123 aa15.71■□□□□ 0.11
DDX55-211ENST00000544429 CAPZA1P52907 286 aa15.71■□□□□ 0.11
DDX55-211ENST00000544429 C1orf100Q5SVJ3 147 aa15.71■□□□□ 0.11
DDX55-211ENST00000544429 TMEM200BQ69YZ2 307 aa15.71■□□□□ 0.11
DDX55-211ENST00000544429 TCF23Q7RTU1 214 aa15.71■□□□□ 0.11
DDX55-211ENST00000544429 OR4S1Q8NGB4 309 aa15.71■□□□□ 0.11
DDX55-211ENST00000544429 TBC1D15Q8TC07 691 aa15.71■□□□□ 0.11
DDX55-211ENST00000544429 TNFRSF14Q92956 283 aa15.71■□□□□ 0.11
DDX55-211ENST00000544429 MUL1Q969V5 352 aa15.71■□□□□ 0.11
DDX55-211ENST00000544429 GFI1Q99684 422 aa15.71■□□□□ 0.11
DDX55-211ENST00000544429 IFT22Q9H7X7 185 aa15.71■□□□□ 0.11
DDX55-211ENST00000544429 TRAV40A0A0B4J280 105 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 CENPVL3A0A0U1RRI6 287 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 SLC33A1O00400 549 aaPredicted RBP15.7■□□□□ 0.1
DDX55-211ENST00000544429 CCRL2O00421 344 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 MGST3O14880 152 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 ZNF780AO75290 641 aaPredicted RBP15.7■□□□□ 0.1
DDX55-211ENST00000544429 ARL6IP5O75915 188 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 ERP29P30040 261 aaKnown RBP15.7■□□□□ 0.1
DDX55-211ENST00000544429 SNU13P55769 128 aaKnown RBP15.7■□□□□ 0.1
DDX55-211ENST00000544429 DLX6P56179 175 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 RBM11P57052 281 aaKnown RBP15.7■□□□□ 0.1
DDX55-211ENST00000544429 BPIFB3P59826 476 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 SCGB2A2Q13296 93 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 PDCD1Q15116 288 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 PIGYQ3MUY2 71 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 SYT6Q5T7P8 510 aaPredicted RBP15.7■□□□□ 0.1
DDX55-211ENST00000544429 JAGN1Q8N5M9 183 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 PCGF1Q9BSM1 259 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 ONECUT1Q9UBC0 465 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 ZNF69Q9UC07 566 aa15.7■□□□□ 0.1
DDX55-211ENST00000544429 MRPS28Q9Y2Q9 187 aaKnown RBP15.7■□□□□ 0.1
DDX55-211ENST00000544429 FBN1P35555 2871 aaKnown RBP15.69■□□□□ 0.1
DDX55-211ENST00000544429 TRDV1A0A1B0GX56 115 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 A0A1W2PP11 408 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 SIRPB1O00241 398 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 HTR3BO95264 441 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 GABRR1P24046 479 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 PAX5Q02548 391 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 MEF2CQ06413 473 aaPredicted RBP15.69■□□□□ 0.1
DDX55-211ENST00000544429 GPR176Q14439 515 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 ZNF273Q14593 569 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 USP43Q70EL4 1123 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 VMO1Q7Z5L0 202 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 CMTM4Q8IZR5 234 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 OSR2Q8N2R0 312 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 OR4M1Q8NGD0 313 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 FOXRED1Q96CU9 486 aaPredicted RBP15.69■□□□□ 0.1
DDX55-211ENST00000544429 MRPS24Q96EL2 167 aaKnown RBP15.69■□□□□ 0.1
DDX55-211ENST00000544429 CHST6Q9GZX3 395 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 GHRLQ9UBU3 117 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 ING4Q9UNL4 249 aa15.69■□□□□ 0.1
DDX55-211ENST00000544429 KIAA2026Q5HYC2 2103 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 TRAV24A0A0B4J272 114 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 A0A1W2PQ09 198 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 TRIM64CA6NLI5 447 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 SLC22A1O15245 554 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 TNFAIP8O95379 198 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 PRTN3P24158 256 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 PSMB9P28065 219 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 GRK1Q15835 563 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 SLC22A6Q4U2R8 563 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 GLIPR1L1Q6UWM5 242 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 GDPD3Q7L5L3 318 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 LINC00596Q86U02 117 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 FAM185AQ8N0U4 392 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 BCL6BQ8N143 479 aaPredicted RBP15.68■□□□□ 0.1
DDX55-211ENST00000544429 ZNF696Q9H7X3 374 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 METTL8Q9H825 291 aaKnown RBP15.68■□□□□ 0.1
DDX55-211ENST00000544429 ZNF581Q9P0T4 197 aa15.68■□□□□ 0.1
DDX55-211ENST00000544429 ST3GAL6Q9Y274 331 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms