RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 FUT3P21217 361 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 NFYAP23511 347 aaPredicted RBP11.62□□□□□ -0.55
HCFC2-202ENST00000544223 FGF12P61328 243 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 C11orf88Q6PI97 169 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 OVCH2Q7RTZ1 564 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 WFDC8Q8IUA0 241 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 CCDC36Q8IYA8 594 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 CCDC107Q8WV48 283 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 TECTBQ96PL2 329 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 PPA2Q9H2U2 334 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 IL36GQ9NZH8 169 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 ANXA10Q9UJ72 324 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 ANAPC10Q9UM13 185 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 ANKHD1Q8IWZ3 2542 aaKnown RBP11.62□□□□□ -0.55
HCFC2-202ENST00000544223 A6NLC8 198 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 KCNAB3O43448 404 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 ZCCHC24Q8N2G6 241 aaKnown RBP11.61□□□□□ -0.55
HCFC2-202ENST00000544223 OR2Z1Q8NG97 314 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 SLC25A21Q9BQT8 299 aaPredicted RBP11.61□□□□□ -0.55
HCFC2-202ENST00000544223 SFXN3Q9BWM7 321 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 CSMD2Q7Z408 3487 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 TRAV24A0A0B4J272 114 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 FAM25EA8MYX2 175 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 PRAF2O60831 178 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 ZNF44P15621 663 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 RCC1P18754 421 aaPredicted RBP11.61□□□□□ -0.55
HCFC2-202ENST00000544223 MECP2P51608 486 aaKnown RBP11.61□□□□□ -0.55
HCFC2-202ENST00000544223 CDSNQ15517 529 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 LRRC37A5PQ49AS3 106 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 ZNF573Q86YE8 665 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 FAM58AQ8N1B3 248 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 PRR18Q8N4B5 295 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 BOLLQ8N9W6 283 aaKnown RBP11.61□□□□□ -0.55
HCFC2-202ENST00000544223 SUMF2Q8NBJ7 301 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 OR2AK2Q8NG84 335 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 ZNF431Q8TF32 576 aaPredicted RBP11.61□□□□□ -0.55
HCFC2-202ENST00000544223 TMEM230Q96A57 120 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 MUCL1Q96DR8 90 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 RTBDNQ9BSG5 229 aaPredicted RBP11.61□□□□□ -0.55
HCFC2-202ENST00000544223 GPN1Q9HCN4 374 aaPredicted RBP11.61□□□□□ -0.55
HCFC2-202ENST00000544223 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.61□□□□□ -0.55
HCFC2-202ENST00000544223 TMEM100Q9NV29 134 aa11.61□□□□□ -0.55
HCFC2-202ENST00000544223 NOP16Q9Y3C1 178 aaKnown RBP11.61□□□□□ -0.55
HCFC2-202ENST00000544223 IQCF6A8MYZ5 107 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 SLC22A5O76082 557 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 IL5P05113 134 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 SCTP09683 121 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 OR5H8P0DN80 308 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 GRNP28799 593 aaKnown RBP11.6□□□□□ -0.55
HCFC2-202ENST00000544223 ID4P47928 161 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 TIMM23BQ5SRD1 257 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 OR8G5Q8NG78 346 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 RTL8AQ9BWD3 113 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 SLC23A1Q9UHI7 598 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 MPTX1A8MV57 137 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 BET1O15155 118 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 PGAM2P15259 253 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 GCH1P30793 250 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 IL13RA1P78552 427 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 FAM53AQ6NSI3 398 aaPredicted RBP11.6□□□□□ -0.55
HCFC2-202ENST00000544223 TGIF2LYQ8IUE0 185 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 C11orf53Q8IXP5 236 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 OPA3Q9H6K4 179 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 SLC2A8Q9NY64 477 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 HSF4Q9ULV5 492 aa11.6□□□□□ -0.55
HCFC2-202ENST00000544223 hCG_1807616A0A1W2PRN6 198 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 OR5B21A6NL26 309 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 DNASE1P24855 282 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 ATXN7L3Q14CW9 347 aaPredicted RBP11.59□□□□□ -0.55
HCFC2-202ENST00000544223 LY6G6FQ5SQ64 297 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 VAX1Q5SQQ9 334 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 SLC25A42Q86VD7 318 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 SLC7A5P1Q8MH63 180 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 PAIP2BQ9ULR5 123 aaKnown RBP11.59□□□□□ -0.55
HCFC2-202ENST00000544223 USP24Q9UPU5 2620 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 C9orf170A2RU37 121 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 ZSCAN5BA6NJL1 495 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 SPRY3O43610 288 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 NXPH2O95156 264 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 CRHP06850 196 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 ZBTB25P24278 435 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 SUPT4H1P63272 117 aaKnown RBP11.59□□□□□ -0.55
HCFC2-202ENST00000544223 FAM189A2Q15884 450 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 ZNF718Q3SXZ3 478 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 FAM201AQ5SY85 155 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 C9orf62Q8N4C0 152 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 C12orf45Q8N5I9 185 aaPredicted RBP11.59□□□□□ -0.55
HCFC2-202ENST00000544223 DEDD2Q8WXF8 326 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 C12orf4Q9NQ89 552 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 ZNF107Q9UII5 783 aaPredicted RBP11.59□□□□□ -0.55
HCFC2-202ENST00000544223 METRNQ9UJH8 293 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 OSGIN2Q9Y236 505 aa11.59□□□□□ -0.55
HCFC2-202ENST00000544223 SNRPGP15A8MWD9 76 aa11.58□□□□□ -0.56
HCFC2-202ENST00000544223 ADAP1O75689 374 aa11.58□□□□□ -0.56
HCFC2-202ENST00000544223 CRYAAP02489 173 aa11.58□□□□□ -0.56
HCFC2-202ENST00000544223 SEC61A1P61619 476 aaKnown RBP11.58□□□□□ -0.56
HCFC2-202ENST00000544223 IL24Q13007 206 aa11.58□□□□□ -0.56
HCFC2-202ENST00000544223 CDK10Q15131 360 aa11.58□□□□□ -0.56
HCFC2-202ENST00000544223 FAM76BQ5HYJ3 339 aa11.58□□□□□ -0.56
HCFC2-202ENST00000544223 ELP2Q6IA86 826 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms