RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 DYNC1I2Q13409 638 aaKnown RBP10.13□□□□□ -0.79
DDX55-210ENST00000543016 C2orf76Q3KRA6 126 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 CLVS1Q8IUQ0 354 aaPredicted RBP10.13□□□□□ -0.79
DDX55-210ENST00000543016 CIARTQ8N365 385 aaPredicted RBP10.13□□□□□ -0.79
DDX55-210ENST00000543016 CD177Q8N6Q3 437 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 OR10K1Q8NGX5 313 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 TM2D1Q9BX74 207 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 TMEM59Q9BXS4 323 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 CTSZQ9UBR2 303 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 SLC25A10Q9UBX3 287 aaPredicted RBP10.13□□□□□ -0.79
DDX55-210ENST00000543016 RAB22AQ9UL26 194 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 CSPG4Q6UVK1 2322 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 ABCA1O95477 2261 aa10.13□□□□□ -0.79
DDX55-210ENST00000543016 FLNAP21333 2647 aaKnown RBP10.13□□□□□ -0.79
DDX55-210ENST00000543016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.12□□□□□ -0.799e-10■■■■□ 25
DDX55-210ENST00000543016 ACANP16112 2415 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 SMIM31A0A1B0GVY4 71 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 FAM157AC9JC47 383 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 ZNF701M0R085 212 aaPredicted RBP10.12□□□□□ -0.79
DDX55-210ENST00000543016 SMAD7O15105 426 aaKnown RBP10.12□□□□□ -0.79
DDX55-210ENST00000543016 LDLRAD4O15165 306 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 CD5LO43866 347 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 ZNF737O75373 536 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 OR2H2O95918 312 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 TK1P04183 234 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 CSN2P05814 226 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 ZNF44P15621 663 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 IL2RGP31785 369 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 RBMXP38159 391 aaKnown RBP10.12□□□□□ -0.79
DDX55-210ENST00000543016 RPS19P39019 145 aaKnown RBP10.12□□□□□ -0.79
DDX55-210ENST00000543016 SERPINB10P48595 397 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 VBP1P61758 197 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 NCS1P62166 190 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 RPS27AP62979 156 aaKnown RBP10.12□□□□□ -0.79
DDX55-210ENST00000543016 COL10A1Q03692 680 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 MXD1Q05195 221 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 IKZF1Q13422 519 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 BLMHQ13867 455 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 HES5Q5TA89 166 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 Q6P435 159 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 GLCCI1Q86VQ1 547 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 OR8H2Q8N162 312 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 BATF2Q8N1L9 274 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 TEX29Q8N6K0 151 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 FAM216BQ8N7L0 139 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 TMEM185AQ8NFB2 350 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 OR51D1Q8NGF3 324 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 SLC25A46Q96AG3 418 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 MSI2Q96DH6 328 aaKnown RBP10.12□□□□□ -0.79
DDX55-210ENST00000543016 Q96M66 194 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 SELENOIQ9C0D9 397 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 NCOR1P1Q9H4R4 102 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 RNF167Q9H6Y7 350 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 LIN7BQ9HAP6 207 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 ABRACLQ9P1F3 81 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 LPAR3Q9UBY5 353 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 ETV7Q9Y603 341 aa10.12□□□□□ -0.79
DDX55-210ENST00000543016 LOC105371242A0A075B767 164 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 A0A1W2PPH5 198 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 METTL21EPA6NDL7 271 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 KIAA1324LA8MWY0 1029 aaPredicted RBP10.11□□□□□ -0.79
DDX55-210ENST00000543016 J3QLI3 93 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 MGST3O14880 152 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 GEMIN2O14893 280 aaKnown RBP10.11□□□□□ -0.79
DDX55-210ENST00000543016 ENSAO43768 121 aaKnown RBP10.11□□□□□ -0.79
DDX55-210ENST00000543016 SCGNO76038 276 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 OR7C1O76099 320 aaPredicted RBP10.11□□□□□ -0.79
DDX55-210ENST00000543016 MPIG6BO95866 241 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 TGFAP01135 160 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 GABRR1P24046 479 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 DUSP1P28562 367 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 ERP29P30040 261 aaKnown RBP10.11□□□□□ -0.79
DDX55-210ENST00000543016 RORCP51449 518 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 PAX5Q02548 391 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 RBM39Q14498 530 aaKnown RBP10.11□□□□□ -0.79
DDX55-210ENST00000543016 P2RY14Q15391 338 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 PIGYQ3MUY2 71 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 BTNL3Q6UXE8 466 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 GDPD3Q7L5L3 318 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 NR2C2APQ86WQ0 139 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 FAM89BQ8N5H3 189 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 ASCC1Q8N9N2 400 aaKnown RBP10.11□□□□□ -0.79
DDX55-210ENST00000543016 ZNRF1Q8ND25 227 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 MAPK1IP1LQ8NDC0 245 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 TMEM104Q8NE00 496 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 C8orf46Q8TAG6 207 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 RAB40AQ8WXH6 277 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 ACOT12Q8WYK0 555 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 ST8SIA4Q92187 359 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 AP3S1Q92572 193 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 TMEM186Q96B77 213 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 NKX3-1Q99801 234 aaPredicted RBP10.11□□□□□ -0.79
DDX55-210ENST00000543016 DCSTAMPQ9H295 470 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 IL36RNQ9UBH0 155 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 DAPK2Q9UIK4 370 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 DOCK11Q5JSL3 2073 aa10.11□□□□□ -0.79
DDX55-210ENST00000543016 F8P00451 2351 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 A0A0G2JMP0 313 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 A0A0X1KG70 313 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 KIR2DS1A0A191URI9 304 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms