RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 TSSK2Q96PF2 358 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 POPDC3Q9HBV1 291 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 THAP10Q9P2Z0 257 aaPredicted RBP5.42□□□□□ -1.54
LMO3-225ENST00000541295 B4GALT7Q9UBV7 327 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 BOKQ9UMX3 212 aaPredicted RBP5.42□□□□□ -1.54
LMO3-225ENST00000541295 IGHV1-69-2A0A0G2JMI3 117 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.42□□□□□ -1.54
LMO3-225ENST00000541295 DCTN6O00399 190 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 TMPRSS2O15393 492 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 SLC31A1O15431 190 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 C1QTNF9P0C862 333 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 HOXB9P17482 250 aaPredicted RBP5.42□□□□□ -1.54
LMO3-225ENST00000541295 OR1D4P47884 311 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 WNT3P56703 355 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 ISL1P61371 349 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 ACSM2AQ08AH3 577 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 ACSM2BQ68CK6 577 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 ZNF548Q8NEK5 533 aaPredicted RBP5.42□□□□□ -1.54
LMO3-225ENST00000541295 OR2T12Q8NG77 320 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 C10orf35Q96D05 121 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 DUX3Q96PT4 197 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 MGLLQ99685 303 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 PBX4Q9BYU1 374 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 CHST8Q9H2A9 424 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 PATZ1Q9HBE1 687 aaKnown RBP5.42□□□□□ -1.54
LMO3-225ENST00000541295 EXOSC3Q9NQT5 275 aaKnown RBP5.42□□□□□ -1.54
LMO3-225ENST00000541295 TESQ9UGI8 421 aaKnown RBP5.42□□□□□ -1.54
LMO3-225ENST00000541295 CYSLTR1Q9Y271 337 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 ATG2BQ96BY7 2078 aa5.42□□□□□ -1.54
LMO3-225ENST00000541295 MPPED1O15442 326 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 HLA-AP01891 365 aaKnown RBP5.41□□□□□ -1.54
LMO3-225ENST00000541295 TMEM225BP0DP42 221 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 HIST1H1CP16403 213 aaKnown RBP5.41□□□□□ -1.54
LMO3-225ENST00000541295 CD34P28906 385 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 HHEXQ03014 270 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 GINS1Q14691 196 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 TMEM207Q6UWW9 146 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 Q6ZSR9 355 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 RFLNAQ6ZTI6 216 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 GPSM1Q86YR5 675 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 CLDN19Q8N6F1 224 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 NOXO1Q8NFA2 376 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 ZNF675Q8TD23 568 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 GPR119Q8TDV5 335 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 SNRNP40Q96DI7 357 aaKnown RBP5.41□□□□□ -1.54
LMO3-225ENST00000541295 OXGR1Q96P68 337 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 CLDND1Q9NY35 253 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 KCNIP1Q9NZI2 227 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 NTMQ9P121 344 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 SIGLEC9Q9Y336 463 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 BRWD1Q9NSI6 2320 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 TINCRA0A1B0GVN0 87 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 A8MT66 165 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 H3BQ15 152 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 RAB27BO00194 218 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 NKX2-8O15522 239 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 CREBL2O60519 120 aaPredicted RBP5.41□□□□□ -1.54
LMO3-225ENST00000541295 NRASP01111 189 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 CRYAAP02489 173 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 FURINP09958 794 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 SBK3P0C264 359 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 PRLHRP49683 370 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 DHRS2Q13268 280 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 ST3GAL2Q16842 350 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 CTU2Q2VPK5 515 aaKnown RBP5.41□□□□□ -1.54
LMO3-225ENST00000541295 TECRLQ5HYJ1 363 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 SOHLH1Q5JUK2 328 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 PLXDC2Q6UX71 529 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 DET1Q7L5Y6 550 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 GALNT16Q8N428 558 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 PTGR2Q8N8N7 351 aaPredicted RBP5.41□□□□□ -1.54
LMO3-225ENST00000541295 OR52R1Q8NGF1 315 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 C1QTNF4Q9BXJ3 329 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 EGLN3Q9H6Z9 239 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 AIG1Q9NVV5 245 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 ST6GALNAC2Q9UJ37 374 aa5.41□□□□□ -1.54
LMO3-225ENST00000541295 EXO1Q9UQ84 846 aaKnown RBP5.41□□□□□ -1.54
LMO3-225ENST00000541295 A0A0J9YY10 115 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 KBTBD11-OT1A0A1B0GTJ5 212 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 SPAARA0A1B0GVQ0 90 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 A0A1B0GX78 115 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 UPK1AO00322 258 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 GALR3O60755 368 aaPredicted RBP5.4□□□□□ -1.54
LMO3-225ENST00000541295 ZNF37AP17032 561 aaPredicted RBP5.4□□□□□ -1.54
LMO3-225ENST00000541295 TNFRSF1BP20333 461 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 GPM6AP51674 278 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 FUT6P51993 359 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 LRRC75BQ2VPJ9 315 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 LRRC10Q5BKY1 277 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 LYPLAL1Q5VWZ2 237 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 LCN8Q6JVE9 175 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 SLC23A3Q6PIS1 610 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 PNKDQ8N490 385 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 BAALCQ8WXS3 180 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 ZG16BQ96DA0 208 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 SCARF2Q96GP6 870 aaPredicted RBP5.4□□□□□ -1.54
LMO3-225ENST00000541295 LRRC3BQ96PB8 259 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 NUDT22Q9BRQ3 303 aa5.4□□□□□ -1.54
LMO3-225ENST00000541295 POLR2J3Q9H1A7 115 aaKnown RBP5.4□□□□□ -1.54
LMO3-225ENST00000541295 FAM206AQ9NX38 181 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms