RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 GFOD1Q9NXC2 390 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 GAR1Q9NY12 217 aaKnown RBP12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 LRFN1Q9P244 771 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 TNFSF12O43508 249 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 BPNT1O95861 308 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 IGHG1P01857 330 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 ISG15P05161 165 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 SNU13P55769 128 aaKnown RBP12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 CLDN17P56750 224 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 STX12Q86Y82 276 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 C5orf66Q9H5L9 145 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 ANKUB1A6NFN9 424 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 FAM166BA8MTA8 275 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 SERPINA7P05543 415 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 CD5P06127 495 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 FAHP16930 419 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 APOBEC1P41238 236 aaKnown RBP12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 SSR4P51571 173 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 DVL1P1P54792 670 aaPredicted RBP12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 ANKRD55Q3KP44 614 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 BRICD5Q6PL45 260 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 HSD17B11Q8NBQ5 300 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 OR14K1Q8NGZ2 314 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 ZNF552Q9H707 407 aaPredicted RBP12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 PARPBPQ9NWS1 579 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 UTP20O75691 2785 aaKnown RBP12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 FLNCQ14315 2725 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 CDC14BO60729 498 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 FAM87AP0C7U9 286 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 FOLR2P14207 255 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 TMEM50BP56557 158 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 EXT1Q16394 746 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 GUK1Q16774 197 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 TOMM40LQ969M1 308 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 RBM24Q9BX46 236 aaKnown RBP12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 PRDM13Q9H4Q3 707 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 WIF1Q9Y5W5 379 aa12.47□□□□□ -0.41
SFSWAP-210ENST00000541286 A0A0A6YYH2 397 aa12.46□□□□□ -0.41
SFSWAP-210ENST00000541286 FAM221AA4D161 298 aa12.46□□□□□ -0.41
SFSWAP-210ENST00000541286 A6NJ64 397 aa12.46□□□□□ -0.41
SFSWAP-210ENST00000541286 HIST1H1DP16402 221 aaKnown RBP12.46□□□□□ -0.41
SFSWAP-210ENST00000541286 RAB5CP51148 216 aa12.46□□□□□ -0.41
SFSWAP-210ENST00000541286 CHRFAM7AQ494W8 412 aa12.46□□□□□ -0.41
SFSWAP-210ENST00000541286 TMEM128Q5BJH2 165 aa12.46□□□□□ -0.41
SFSWAP-210ENST00000541286 ZDHHC22Q8N966 263 aa12.46□□□□□ -0.41
SFSWAP-210ENST00000541286 OR5L2Q8NGL0 311 aa12.46□□□□□ -0.41
SFSWAP-210ENST00000541286 HDHD3Q9BSH5 251 aaPredicted RBP12.46□□□□□ -0.41
SFSWAP-210ENST00000541286 NEURL1O76050 574 aa12.46□□□□□ -0.42
SFSWAP-210ENST00000541286 SOD3P08294 240 aa12.46□□□□□ -0.42
SFSWAP-210ENST00000541286 FCGR2AP12318 317 aa12.46□□□□□ -0.42
SFSWAP-210ENST00000541286 DPPA2Q7Z7J5 298 aa12.46□□□□□ -0.42
SFSWAP-210ENST00000541286 YRDCQ86U90 279 aaKnown RBP12.46□□□□□ -0.42
SFSWAP-210ENST00000541286 KCNG3Q8TAE7 436 aa12.46□□□□□ -0.42
SFSWAP-210ENST00000541286 M1APQ8TC57 530 aa12.46□□□□□ -0.42
SFSWAP-210ENST00000541286 ST8SIA1Q92185 356 aa12.46□□□□□ -0.42
SFSWAP-210ENST00000541286 SH3BGRL3Q9H299 93 aa12.46□□□□□ -0.42
SFSWAP-210ENST00000541286 TIMM10BQ9Y5J6 103 aa12.46□□□□□ -0.42
SFSWAP-210ENST00000541286 DIDO1Q9BTC0 2240 aaKnown RBP12.46□□□□□ -0.42
SFSWAP-210ENST00000541286 SPTBN1Q01082 2364 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 MFNGO00587 321 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 ABHD17BQ5VST6 288 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 NSUN5P2Q63ZY6 315 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 C20orf196Q8IYI0 205 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 URM1Q9BTM9 101 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 B3GAT1Q9P2W7 334 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 B3GALT5Q9Y2C3 310 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 FREM1Q5H8C1 2179 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 E9PLN8 166 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 XRCC2O43543 280 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 ANGPTL7O43827 346 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 IFNA17P01571 189 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 DBHP09172 617 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 PDCD1Q15116 288 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 C3AR1Q16581 482 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 C6orf201Q7Z4U5 140 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 SMIM8Q96KF7 97 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 EGLN1Q9GZT9 426 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 ALKBH4Q9NXW9 302 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 FBXL17Q9UF56 701 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 NCOA6Q14686 2063 aaPredicted RBP12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 TGIF2-C20orf24A0A0A6YYL0 155 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 LOC390937A0A1W2PQ73 354 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 OR5H15A6NDH6 313 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 MELTFP08582 738 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 OPRM1P35372 400 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 FXYD4P59646 89 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 LSM6P62312 80 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 OR1C1Q15619 314 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 SP6Q3SY56 376 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 BTNL8Q6UX41 500 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 OR5AS1Q8N127 324 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 SNIP1Q8TAD8 396 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 SLC5A7Q9GZV3 580 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 OR10A2Q9H208 303 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 KCNJ16Q9NPI9 418 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 FLVCR1Q9Y5Y0 555 aa12.45□□□□□ -0.42
SFSWAP-210ENST00000541286 GTF3C1Q12789 2109 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 TRGC2P03986 189 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 CXCL1P09341 107 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms