RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 CLDN19Q8N6F1 224 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 CDRT4Q8N9R6 151 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 B3GNT7Q8NFL0 401 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 OR2M7Q8NG81 312 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 OR1M1Q8NGA1 313 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 OR4D9Q8NGE8 314 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 OR13D1Q8NGV5 346 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 OR4K15Q8NH41 348 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 SDR42E1Q8WUS8 393 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 TMEM203Q969S6 136 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 PTH2Q96A98 100 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 FAM131CQ96AQ9 280 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 C12orf43Q96C57 262 aaKnown RBP3.37□□□□□ -1.87
YBX3-210ENST00000540975 DCUN1D1Q96GG9 259 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 RNF170Q96K19 258 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 FCRL1Q96LA6 429 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 VAT1Q99536 393 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 RBBP8Q99708 897 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 NIPSNAP3BQ9BS92 247 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 MAP1LC3CQ9BXW4 147 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 PORCNQ9H237 461 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 PLEKHA1Q9HB21 404 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 TRAPPC4Q9Y296 219 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 ARL5AQ9Y689 179 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 DIP2BQ9P265 1576 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 KIF26AQ9ULI4 1882 aaPredicted RBP3.37□□□□□ -1.87
YBX3-210ENST00000540975 FMN2Q9NZ56 1722 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 NWD2Q9ULI1 1742 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 MARF1Q9Y4F3 1742 aaKnown RBP3.36□□□□□ -1.87
YBX3-210ENST00000540975 SPEF2Q9C093 1822 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 LINC00862A6NCI5 91 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 TRDCB7Z8K6 153 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 PPIAL4DF5H284 164 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 TSTD3H0UI37 97 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 H3BNH8 94 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 SULT1C2O00338 296 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 CDIPTO14735 213 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 AGPAT2O15120 278 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 TGOLN2O43493 480 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 EIF3GO75821 320 aaKnown RBP eCLIP3.36□□□□□ -1.87
YBX3-210ENST00000540975 OR2J2O76002 312 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 RCBTB2O95199 551 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 TDP2O95551 362 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 TTC4O95801 387 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 HLA-GP17693 338 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 IGFBP3P17936 291 aaPredicted RBP3.36□□□□□ -1.87
YBX3-210ENST00000540975 GZMHP20718 246 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 STOMP27105 288 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 CD82P27701 267 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 CASP1P29466 404 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 FMO3P31513 532 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 GLP1RP43220 463 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 VDAC2P45880 294 aaPredicted RBP3.36□□□□□ -1.87
YBX3-210ENST00000540975 UQCRFS1P47985 274 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 CSNK1A1P48729 337 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 XKP51811 444 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 DNAJB13P59910 316 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 IFITM3Q01628 133 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 PJVKQ0ZLH3 352 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 TATDN3Q17R31 274 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 TP53I3Q53FA7 332 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 LPCAT4Q643R3 524 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 FAM45BPQ6NSW5 357 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 DNM1P34Q6PK57 102 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 SCIMPQ6UWF3 145 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 MBOAT1Q6ZNC8 495 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 ZNF767PQ75MW2 155 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 GRINAQ7Z429 371 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 CTAGE3PQ8IX95 158 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 TMEM123Q8N131 208 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 SYS1Q8N2H4 156 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 OR1L4Q8NGR5 311 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 OR10K1Q8NGX5 313 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 CD200R1Q8TD46 325 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 ACER1Q8TDN7 264 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 PHF10Q8WUB8 498 aaKnown RBP3.36□□□□□ -1.87
YBX3-210ENST00000540975 SFT2D1Q8WV19 159 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 SPRYD4Q8WW59 207 aaPredicted RBP3.36□□□□□ -1.87
YBX3-210ENST00000540975 PIH1D2Q8WWB5 315 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 C11orf40Q8WZ69 217 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 FGF11Q92914 225 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 NAT6Q93015 286 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 TMEM208Q9BTX3 173 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 BEX2Q9BXY8 128 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 ING2Q9H160 280 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 Q9H521 79 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 TPT1P8Q9HAU6 139 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 ELOVL3Q9HB03 270 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 RNF11Q9Y3C5 154 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 MYH11P35749 1972 aa3.36□□□□□ -1.87
YBX3-210ENST00000540975 KIF13BQ9NQT8 1826 aa3.35□□□□□ -1.87
YBX3-210ENST00000540975 MYO5BQ9ULV0 1848 aa3.35□□□□□ -1.87
YBX3-210ENST00000540975 PTPRFP10586 1907 aa3.35□□□□□ -1.87
YBX3-210ENST00000540975 PPIAL4EA0A075B759 164 aa3.35□□□□□ -1.87
YBX3-210ENST00000540975 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.35□□□□□ -1.87
YBX3-210ENST00000540975 TRBV11-1A0A0K0K1C0 115 aa3.35□□□□□ -1.87
YBX3-210ENST00000540975 H0Y980 276 aa3.35□□□□□ -1.87
YBX3-210ENST00000540975 CLDN34H7C241 214 aa3.35□□□□□ -1.87
YBX3-210ENST00000540975 KCNK1O00180 336 aa3.35□□□□□ -1.87
YBX3-210ENST00000540975 AZIN1O14977 448 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms