RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 CTSZQ9UBR2 303 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 RAB22AQ9UL26 194 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 HSF4Q9ULV5 492 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 KCNK7Q9Y2U2 307 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 MAB21L2Q9Y586 359 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 V9GYH0 126 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 YLPM1P49750 1951 aaKnown RBP8.8□□□□□ -1
VPS33A-204ENST00000540669 MALRD1Q5VYJ5 2156 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 PPIAL4EA0A075B759 164 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 hCG_1807616A0A1W2PRN6 198 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 PPIAL4DF5H284 164 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 SLC33A1O00400 549 aaPredicted RBP8.79□□□□□ -1
VPS33A-204ENST00000540669 SIGLEC5O15389 551 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 CA11O75493 328 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 SCGNO76038 276 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 HTR3BO95264 441 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 GLAP06280 429 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 MELTFP08582 738 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 PPIAL4FP0DN26 164 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 PRKACAP17612 351 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 ELK1P19419 428 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 MDH2P40926 338 aaKnown RBP8.79□□□□□ -1
VPS33A-204ENST00000540669 PLAC9Q5JTB6 97 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 ZNF841Q6ZN19 808 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 Q6ZPA2 131 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 C17orf107Q6ZR85 190 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 DCDC5Q6ZRR9 648 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 SAMD12Q8N8I0 201 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 CHST4Q8NCG5 386 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 CCL17Q92583 94 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 FAM46BQ96A09 425 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 TMEM246Q9BRR3 403 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 SHARPINQ9H0F6 387 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 BANF2Q9H503 90 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 PCDHB16Q9NRJ7 776 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 ADAM30Q9UKF2 790 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 ANAPC10Q9UM13 185 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 ING4Q9UNL4 249 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 ST3GAL6Q9Y274 331 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 PPIAL4AQ9Y536 164 aa8.79□□□□□ -1
VPS33A-204ENST00000540669 TRAV38-1A0A0B4J264 116 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 A0A1B0GW55 424 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 TMEM82A0PJX8 343 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 CEACAM18A8MTB9 384 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 A8MXK9 166 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 SOCS1O15524 211 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 NDUFA2O43678 99 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 PSPNO60542 156 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 HPGDSO60760 199 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 PDCD6O75340 191 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 CRTAPO75718 401 aaPredicted RBP8.78□□□□□ -1
VPS33A-204ENST00000540669 OR2H2O95918 312 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 HAND1O96004 215 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 CSTBP04080 98 aaKnown RBP8.78□□□□□ -1
VPS33A-204ENST00000540669 CHRM2P08172 466 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 DUX4L2P0CJ85 424 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 DUX4L3P0CJ86 424 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 DUX4L4P0CJ87 422 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 DUX4L5P0CJ88 424 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 DUX4L6P0CJ89 424 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 DUX4L7P0CJ90 424 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 IRF2P14316 349 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 HIST1H1DP16402 221 aaKnown RBP8.78□□□□□ -1
VPS33A-204ENST00000540669 OR3A1P47881 315 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 PDLIM4P50479 330 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 DSCR9P59020 149 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 FAM189A2Q15884 450 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 TAF9Q16594 264 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 RAB12Q6IQ22 244 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 MZT2AQ6P582 158 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 DUX4L9Q6RFH8 374 aaPredicted RBP8.78□□□□□ -1
VPS33A-204ENST00000540669 BATF2Q8N1L9 274 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 MUC20Q8N307 709 aaPredicted RBP8.78□□□□□ -1
VPS33A-204ENST00000540669 OR56B1Q8NGI3 324 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 C1orf159Q96HA4 380 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 URM1Q9BTM9 101 aaKnown RBP8.78□□□□□ -1
VPS33A-204ENST00000540669 SELENOIQ9C0D9 397 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 BPESC1Q9GZL8 116 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 FAM234AQ9H0X4 552 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 AKIP1Q9NQ31 210 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 TREM2Q9NZC2 230 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 COMMD3Q9UBI1 195 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 DUX4Q9UBX2 424 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 PEX16Q9Y5Y5 336 aa8.78□□□□□ -1
VPS33A-204ENST00000540669 DOCK11Q5JSL3 2073 aa8.77□□□□□ -1
VPS33A-204ENST00000540669 ANK3Q12955 4377 aaKnown RBP8.77□□□□□ -1.01
VPS33A-204ENST00000540669 IGHV3OR15-7A0A075B7D8 119 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 IGHV4-30-2A0A087WSY4 118 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 RFPL4AA6NLU0 287 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 RFPL4AL1F8VTS6 287 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 K7N7A8 449 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 XRCC3O43542 346 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 SSX4O60224 188 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 NAPSAO96009 420 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 IGHV2-5P01817 119 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 HLA-DQB1P01920 261 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 TFF1P04155 84 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 SELLP14151 372 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 CD99P14209 185 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 CDK2P24941 298 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms