RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 HHATLQ9HCP6 504 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 MEPEQ9NQ76 525 aaPredicted RBP11.05□□□□□ -0.64
DDX55-206ENST00000539934 PRTFDC1Q9NRG1 225 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 LYRM2Q9NU23 88 aaPredicted RBP11.05□□□□□ -0.64
DDX55-206ENST00000539934 NDUFB11Q9NX14 153 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 YARS2Q9Y2Z4 477 aaKnown RBP11.05□□□□□ -0.64
DDX55-206ENST00000539934 UBE2QL1A1L167 161 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 TPST2O60704 377 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 GLSO94925 669 aaPredicted RBP11.04□□□□□ -0.64
DDX55-206ENST00000539934 ACHEP22303 614 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 S100A10P60903 97 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 EBPQ15125 230 aaKnown RBP11.04□□□□□ -0.64
DDX55-206ENST00000539934 ZNF595Q8IYB9 648 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 NUDCD2Q8WVJ2 157 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 DYRK2Q92630 601 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 SS18L2Q9UHA2 77 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 ZNF391Q9UJN7 358 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 C14orf166Q9Y224 244 aaKnown RBP11.04□□□□□ -0.64
DDX55-206ENST00000539934 RCE1Q9Y256 329 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 TSSC4Q9Y5U2 329 aaPredicted RBP11.04□□□□□ -0.64
DDX55-206ENST00000539934 GGT3PA6NGU5 568 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 HS3ST1O14792 307 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 OR2F2O95006 317 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 SYNGR4O95473 234 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 DUSP1P28562 367 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 AQP2P41181 271 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 POLR2HP52434 150 aaKnown RBP11.04□□□□□ -0.64
DDX55-206ENST00000539934 MGAT2Q10469 447 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 ZP4Q12836 540 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 OR2F1Q13607 317 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 DCST2Q5T1A1 773 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 CDCP2Q5VXM1 449 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 RAET1LQ5VY80 246 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 CRYBG3Q68DQ2 2970 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 WDR82Q6UXN9 313 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 DGAT2L6Q6ZPD8 337 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 OR52R1Q8NGF1 315 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 RNF141Q8WVD5 230 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 SDF2Q99470 211 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 RBKSQ9H477 322 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 CA10Q9NS85 328 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 CLN8Q9UBY8 286 aa11.04□□□□□ -0.64
DDX55-206ENST00000539934 LY6G6EA0A0G2JKS1 128 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 TMEM235A6NFC5 223 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 OR5B21A6NL26 309 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 TMEM150CB9EJG8 249 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 H0YIG0 161 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 IFI6P09912 130 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 LIPCP11150 499 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 FGF5P12034 268 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 AZU1P20160 251 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 GDF1P27539 372 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 CHATP28329 748 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 RBMS1P29558 406 aaKnown RBP11.03□□□□□ -0.64
DDX55-206ENST00000539934 CDK5Q00535 292 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 ZSWIM7Q19AV6 140 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 C22orf42Q6IC83 251 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 ASCL4Q6XD76 172 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 Q6ZTK2 550 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 NIT1Q86X76 327 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 OR6V1Q8N148 313 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 STPG4Q8N801 248 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 OR6N1Q8NGY5 312 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 BRIX1Q8TDN6 353 aaKnown RBP11.03□□□□□ -0.64
DDX55-206ENST00000539934 DGAT2Q96PD7 388 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 SIGMAR1Q99720 223 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 FRRS1LQ9P0K9 344 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 TNFSF18Q9UNG2 199 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 ZNF443Q9Y2A4 671 aaPredicted RBP11.03□□□□□ -0.64
DDX55-206ENST00000539934 U3KQA8 63 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 PRRC2CQ9Y520 2896 aaKnown RBP11.03□□□□□ -0.64
DDX55-206ENST00000539934 LANCL1O43813 399 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 PGAM2P15259 253 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 GABRA3P34903 492 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 PCK2Q16822 640 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 LINC00303Q3SY05 128 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 GUSBP11Q6P575 273 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 SLC30A7Q8NEW0 376 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 ZNF519Q8TB69 540 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 NKX3-1Q99801 234 aaPredicted RBP11.03□□□□□ -0.64
DDX55-206ENST00000539934 TMEM231Q9H6L2 316 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 ZNF160Q9HCG1 818 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 PSG8Q9UQ74 426 aa11.03□□□□□ -0.64
DDX55-206ENST00000539934 CPSF4LA6NMK7 179 aaKnown RBP11.02□□□□□ -0.65
DDX55-206ENST00000539934 TOX4O94842 621 aa11.02□□□□□ -0.65
DDX55-206ENST00000539934 OR2C1O95371 312 aa11.02□□□□□ -0.65
DDX55-206ENST00000539934 IL5P05113 134 aa11.02□□□□□ -0.65
DDX55-206ENST00000539934 TRGC1P0CF51 173 aa11.02□□□□□ -0.65
DDX55-206ENST00000539934 CD1CP29017 333 aa11.02□□□□□ -0.65
DDX55-206ENST00000539934 GCSAMLQ5JQS6 135 aa11.02□□□□□ -0.65
DDX55-206ENST00000539934 HIST2H2BCQ6DN03 193 aa11.02□□□□□ -0.65
DDX55-206ENST00000539934 PODNL1Q6PEZ8 512 aa11.02□□□□□ -0.65
DDX55-206ENST00000539934 GLDNQ6ZMI3 551 aaPredicted RBP11.02□□□□□ -0.65
DDX55-206ENST00000539934 ACOT7LQ6ZUV0 252 aa11.02□□□□□ -0.65
DDX55-206ENST00000539934 LINC00471Q8N535 108 aa11.02□□□□□ -0.65
DDX55-206ENST00000539934 IP6K3Q96PC2 410 aa11.02□□□□□ -0.65
DDX55-206ENST00000539934 ARHGAP9Q9BRR9 750 aa11.02□□□□□ -0.65
DDX55-206ENST00000539934 GPR35Q9HC97 309 aa11.02□□□□□ -0.65
DDX55-206ENST00000539934 CNOT2Q9NZN8 540 aaKnown RBP11.02□□□□□ -0.65
DDX55-206ENST00000539934 ITPR2Q14571 2701 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms