RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 DPM3Q9P2X0 92 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 SAC3D1A6NKF1 404 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 LEUTXA8MZ59 168 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 SLC16A6O15403 523 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 PIN1P1O15428 100 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 ENTPD6O75354 484 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 ISG15P05161 165 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 PF4V1P10720 104 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 CD28P10747 220 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 DUSP1P28562 367 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 ZNF85Q03923 595 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 PDZK1IP1Q13113 114 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 FBLN7Q53RD9 439 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 KPRPQ5T749 579 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-211ENST00000539843 CCDC144NLQ6NUI1 221 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 RDH10Q8IZV5 341 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 LYG1Q8N1E2 194 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 ABHD12Q8N2K0 398 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 CHST4Q8NCG5 386 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 OR4D6Q8NGJ1 314 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 SGCDQ92629 289 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 FGGYQ96C11 551 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 ADAT3Q96EY9 351 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-211ENST00000539843 HMG20AQ9NP66 347 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 TAS2R3Q9NYW6 316 aa12.32□□□□□ -0.44
UBE3B-211ENST00000539843 PSPNO60542 156 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 CLIC3O95833 236 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 HCKP08631 526 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 POLR2IP36954 125 aaKnown RBP12.31□□□□□ -0.44
UBE3B-211ENST00000539843 MNDAP41218 407 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 PTGFRP43088 359 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 KIR3DL2P43630 455 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 NPBWR2P48146 333 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 CCR9P51686 369 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 PRRX1P54821 245 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 ISL1P61371 349 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 MRPL28Q13084 256 aaKnown RBP12.31□□□□□ -0.44
UBE3B-211ENST00000539843 CCBE1Q6UXH8 406 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-211ENST00000539843 TCF23Q7RTU1 214 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 ACBD7Q8N6N7 88 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 OR52N4Q8NGI2 321 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 MBOAT4Q96T53 435 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 CITED2Q99967 270 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-211ENST00000539843 LIN7BQ9HAP6 207 aa12.31□□□□□ -0.44
UBE3B-211ENST00000539843 TGP01266 2768 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 J3QLW9 94 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 MAGEB3O15480 346 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 OR2H2O95918 312 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 DBTP11182 482 aaKnown RBP12.3□□□□□ -0.44
UBE3B-211ENST00000539843 ZNF19P17023 458 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 CD33P20138 364 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 CDK2P24941 298 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 OR3A1P47881 315 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 BDH1Q02338 343 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 SCN1BQ07699 218 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 FDX2Q6P4F2 183 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 HEPN1Q6WQI6 88 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 CENPVQ7Z7K6 275 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-211ENST00000539843 C10orf67Q8IYJ2 551 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 SAXO1Q8IYX7 474 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 OR4X2Q8NGF9 303 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 OR13C9Q8NGT0 318 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 MRAPQ8TCY5 172 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 RFT1Q96AA3 541 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 COMMD4Q9H0A8 199 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 MMP28Q9H239 520 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 ZCCHC4Q9H5U6 513 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 PCDHB16Q9NRJ7 776 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 NECAP2Q9NVZ3 263 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 OR6C3Q9NZP0 311 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 FRRS1LQ9P0K9 344 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 IL36RNQ9UBH0 155 aa12.3□□□□□ -0.44
UBE3B-211ENST00000539843 CMYA5Q8N3K9 4069 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 IGKV1-9A0A0C4DH69 117 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 M0QZK8 103 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 MPZL2O60487 215 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 KDM4BO94953 1096 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 PF4P02776 101 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 MT-ND2P03891 347 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 CSN2P05814 226 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 CALCBP10092 127 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 SNRPGP62308 76 aaKnown RBP12.29□□□□□ -0.44
UBE3B-211ENST00000539843 BLCAPP62952 87 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 KRBOX4Q5JUW0 171 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 SLC25A30Q5SVS4 291 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 PRAMEF5Q5TYX0 476 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 OR5AU1Q8NGC0 362 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 OR5D18Q8NGL1 313 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 OR5D14Q8NGL3 314 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 OR4P4Q8NGL7 312 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 HAVCR2Q8TDQ0 301 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 HRASLS5Q96KN8 279 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 C4orf36Q96KX1 117 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 Q96MT0 163 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 SLC25A33Q9BSK2 321 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 WNT10AQ9GZT5 417 aa12.29□□□□□ -0.44
UBE3B-211ENST00000539843 AMMECR1Q9Y4X0 333 aaPredicted RBP12.29□□□□□ -0.44
UBE3B-211ENST00000539843 ODAMA1E959 279 aa12.28□□□□□ -0.44
UBE3B-211ENST00000539843 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-211ENST00000539843 FAM90A22PA8MWA6 464 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms