RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 DUX4L3P0CJ86 424 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 DUX4L4P0CJ87 422 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 DUX4L5P0CJ88 424 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 DUX4L6P0CJ89 424 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 DUX4L7P0CJ90 424 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 BCL3P20749 454 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 GCH1P30793 250 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 CALCRP30988 508 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 S100A11P31949 105 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 OPRM1P35372 400 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 RBMXP38159 391 aaKnown RBP8.71□□□□□ -1.02
SPARC-209ENST00000539687 HERV-K104P61576 105 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 SNRPD2P62316 118 aaKnown RBP8.71□□□□□ -1.02
SPARC-209ENST00000539687 SRPXP78539 464 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 FOXC1Q12948 553 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 OR2F1Q13607 317 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 OPCMLQ14982 345 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 ZNF718Q3SXZ3 478 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 ABCA11PQ4W5N1 156 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 FAM76BQ5HYJ3 339 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 DMRTC1Q5HYR2 192 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 SPIN3Q5JUX0 258 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 TIMM23BQ5SRD1 257 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 AADACL3Q5VUY0 350 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 OR2T2Q6IF00 324 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 VWA1Q6PCB0 445 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 TEX261Q6UWH6 196 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 FAM58AQ8N1B3 248 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 WDR31Q8NA23 367 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 THAP6Q8TBB0 222 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 SLC25A40Q8TBP6 338 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 EXTL1Q92935 676 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 SLAMF9Q96A28 289 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 STARD4Q96DR4 205 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 ADAT1Q9BUB4 502 aaKnown RBP8.71□□□□□ -1.02
SPARC-209ENST00000539687 TMEM100Q9NV29 134 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 C1orf123Q9NWV4 160 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 DKK4Q9UBT3 224 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 DUX4Q9UBX2 424 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 UBQLN2Q9UHD9 624 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 SLC23A1Q9UHI7 598 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 U3KQ87 197 aa8.71□□□□□ -1.02
SPARC-209ENST00000539687 ARHGAP21Q5T5U3 1957 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 FXYD6-FXYD2A0A087WZ82 144 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 C5orf51A6NDU8 294 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 PRRG2O14669 202 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 MSTNO14793 375 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 ARPC5O15511 151 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 IFNA2P01563 188 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 IFNA21P01568 189 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 TK1P04183 234 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 ZNF728P0DKX0 622 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 PRKACAP17612 351 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 KITLGP21583 273 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 CA6P23280 308 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 S100GP29377 79 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 NUP62P37198 522 aaPredicted RBP8.7□□□□□ -1.02
SPARC-209ENST00000539687 AP2S1P53680 142 aaPredicted RBP8.7□□□□□ -1.02
SPARC-209ENST00000539687 RPS23P62266 143 aaKnown RBP8.7□□□□□ -1.02
SPARC-209ENST00000539687 OR8G1Q15617 311 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 Q5BKY6 102 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 LY6G6FQ5SQ64 297 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 MBNL2Q5VZF2 373 aaKnown RBP8.7□□□□□ -1.02
SPARC-209ENST00000539687 C11orf87Q6NUJ2 197 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 SLC22A25Q6T423 547 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 CLEC18BQ6UXF7 455 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 CXorf67Q86X51 503 aaPredicted RBP8.7□□□□□ -1.02
SPARC-209ENST00000539687 KDF1Q8NAX2 398 aaPredicted RBP8.7□□□□□ -1.02
SPARC-209ENST00000539687 ADAD2Q8NCV1 583 aaKnown RBP8.7□□□□□ -1.02
SPARC-209ENST00000539687 OR8G5Q8NG78 346 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 NEK7Q8TDX7 302 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 CASTOR1Q8WTX7 329 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 MOB3AQ96BX8 217 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 MUCL1Q96DR8 90 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 RTBDNQ9BSG5 229 aaPredicted RBP8.7□□□□□ -1.02
SPARC-209ENST00000539687 SUCNR1Q9BXA5 334 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 OR2J1Q9GZK6 312 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 FXYD6Q9H0Q3 95 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 CXXC4Q9H2H0 198 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 MTCH1Q9NZJ7 389 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 ZNF230Q9UIE0 474 aaPredicted RBP8.7□□□□□ -1.02
SPARC-209ENST00000539687 MSRB2Q9Y3D2 182 aa8.7□□□□□ -1.02
SPARC-209ENST00000539687 TEX13DA0A0J9YY54 714 aaPredicted RBP8.69□□□□□ -1.02
SPARC-209ENST00000539687 KANTRA0A1W2PQU2 76 aa8.69□□□□□ -1.02
SPARC-209ENST00000539687 CRYM-AS1A6NIL9 109 aa8.69□□□□□ -1.02
SPARC-209ENST00000539687 SDCBPO00560 298 aaPredicted RBP8.69□□□□□ -1.02
SPARC-209ENST00000539687 NOS1APO75052 506 aaPredicted RBP8.69□□□□□ -1.02
SPARC-209ENST00000539687 B3GALNT1O75752 331 aa8.69□□□□□ -1.02
SPARC-209ENST00000539687 NAPSAO96009 420 aa8.69□□□□□ -1.02
SPARC-209ENST00000539687 CEACAM8P31997 349 aaPredicted RBP8.69□□□□□ -1.02
SPARC-209ENST00000539687 NPBWR2P48146 333 aa8.69□□□□□ -1.02
SPARC-209ENST00000539687 KCNJ3P48549 501 aa8.69□□□□□ -1.02
SPARC-209ENST00000539687 SORDQ00796 357 aa8.69□□□□□ -1.02
SPARC-209ENST00000539687 RBPJQ06330 500 aa8.69□□□□□ -1.02
SPARC-209ENST00000539687 ESCO2Q56NI9 601 aa8.69□□□□□ -1.02
SPARC-209ENST00000539687 DCAF12L2Q5VW00 463 aa8.69□□□□□ -1.02
SPARC-209ENST00000539687 ZNF660Q6AZW8 331 aaPredicted RBP8.69□□□□□ -1.02
SPARC-209ENST00000539687 C17orf107Q6ZR85 190 aa8.69□□□□□ -1.02
SPARC-209ENST00000539687 KCTD9Q7L273 389 aa8.69□□□□□ -1.02
SPARC-209ENST00000539687 ZNF546Q86UE3 836 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms