RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 ZNF788Q6ZQV5 615 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 OR2W3Q7Z3T1 314 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 C1orf87Q8N0U7 546 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 FAM216BQ8N7L0 139 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 GDPD1Q8N9F7 314 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 OR10K1Q8NGX5 313 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 OR51F2Q8NH61 342 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 KCNG3Q8TAE7 436 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 C15orf40Q8WUR7 153 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 DACT3Q96B18 629 aaPredicted RBP10.81□□□□□ -0.68
CCDC42-202ENST00000539522 MSI2Q96DH6 328 aaKnown RBP10.81□□□□□ -0.68
CCDC42-202ENST00000539522 C18orf12Q96KH6 178 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 GAFA1Q96PS6 74 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 S100A13Q99584 98 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 CCL13Q99616 98 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 KCNK15Q9H427 330 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 GSX1Q9H4S2 264 aaPredicted RBP10.81□□□□□ -0.68
CCDC42-202ENST00000539522 DIABLOQ9NR28 239 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 PCDHB16Q9NRJ7 776 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 NLKQ9UBE8 527 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 ING4Q9UNL4 249 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 POLDIP2Q9Y2S7 368 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 MAB21L2Q9Y586 359 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 V9GYH0 126 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 MALRD1Q5VYJ5 2156 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 TMEM272A0A1B0GTI8 110 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 ISPDA4D126 451 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 METTL21EPA6NDL7 271 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 OR2AT4A6NND4 320 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 J3QRK9 145 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 TMEM225BP0DP42 221 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 CD99P14209 185 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 IRF2P14316 349 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 MUC1P15941 1255 aaPredicted RBP10.8□□□□□ -0.68
CCDC42-202ENST00000539522 QRFPP83859 136 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 GPR176Q14439 515 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 PYDC2Q56P42 97 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 ATPAF1Q5TC12 328 aaPredicted RBP10.8□□□□□ -0.68
CCDC42-202ENST00000539522 PYHIN1Q6K0P9 492 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 DCDC5Q6ZRR9 648 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 MKXQ8IYA7 352 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 SAXO1Q8IYX7 474 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 ZSCAN4Q8NAM6 433 aaPredicted RBP10.8□□□□□ -0.68
CCDC42-202ENST00000539522 PXT1Q8NFP0 134 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 OR4M1Q8NGD0 313 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 TNFAIP8L1Q8WVP5 186 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 PHF21AQ96BD5 680 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 TIMD4Q96H15 378 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 GAL3ST1Q99999 423 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 CCDC32Q9BV29 185 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 RHBDL2Q9NX52 303 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 KAAG1Q9UBP8 84 aa10.8□□□□□ -0.68
CCDC42-202ENST00000539522 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.79□□□□□ -0.68
CCDC42-202ENST00000539522 A0A0A6YYH2 397 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 A6NJ64 397 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 RFPL4AA6NLU0 287 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 RFPL4AL1F8VTS6 287 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 XRCC3O43542 346 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 ZNF780AO75290 641 aaPredicted RBP10.79□□□□□ -0.68
CCDC42-202ENST00000539522 DUSP1P28562 367 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 PLA2G7Q13093 441 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 IL18Q14116 193 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 ELP2Q6IA86 826 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 Q6P435 159 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 PEG10Q86TG7 708 aaKnown RBP10.79□□□□□ -0.68
CCDC42-202ENST00000539522 TMEM104Q8NE00 496 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 SLC25A38Q96DW6 304 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 METTL9Q9H1A3 318 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 ATG5Q9H1Y0 275 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 RASL12Q9NYN1 266 aa10.79□□□□□ -0.68
CCDC42-202ENST00000539522 DOCK11Q5JSL3 2073 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 DSCAML1Q8TD84 2053 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 TRAV38-1A0A0B4J264 116 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 TMEM82A0PJX8 343 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 TMEM14DPA8MWL7 114 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 A8MXK9 166 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 TRAPPC2LH3BP13 241 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 PHF1O43189 567 aaPredicted RBP10.78□□□□□ -0.68
CCDC42-202ENST00000539522 ZNF737O75373 536 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 SCGNO76038 276 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 NXPH2O95156 264 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 LY6G6DO95868 133 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 CYB5AP00167 134 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 CHRM2P08172 466 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 VSIG8P0DPA2 414 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 MNDAP41218 407 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 ZNF146Q15072 292 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 PDCD1Q15116 288 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 ZNF79Q15937 498 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 MICBQ29980 383 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 RAB12Q6IQ22 244 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 BIVMQ86UB2 503 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 RTN4RL2Q86UN3 420 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 FAM58AQ8N1B3 248 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 MUC20Q8N307 709 aaPredicted RBP10.78□□□□□ -0.68
CCDC42-202ENST00000539522 SPICQ8N5J4 248 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 ZNRF1Q8ND25 227 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 SDSLQ96GA7 329 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 POM121Q96HA1 1249 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 SRRQ9GZT4 340 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms