RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 GCH1P30793 250 aa10.86□□□□□ -0.67
USP3-203ENST00000538686 COMPP49747 757 aaPredicted RBP10.86□□□□□ -0.67
USP3-203ENST00000538686 SNU13P55769 128 aaKnown RBP10.86□□□□□ -0.67
USP3-203ENST00000538686 CTXN1P60606 82 aa10.86□□□□□ -0.67
USP3-203ENST00000538686 CSNK1G2P78368 415 aa10.86□□□□□ -0.67
USP3-203ENST00000538686 SCGB2A2Q13296 93 aa10.86□□□□□ -0.67
USP3-203ENST00000538686 WDR73Q6P4I2 378 aa10.86□□□□□ -0.67
USP3-203ENST00000538686 C22orf39Q6P5X5 142 aa10.86□□□□□ -0.67
USP3-203ENST00000538686 C17orf78Q8N4C9 275 aa10.86□□□□□ -0.67
USP3-203ENST00000538686 OR52R1Q8NGF1 315 aa10.86□□□□□ -0.67
USP3-203ENST00000538686 OR2I1PQ8NGU4 316 aa10.86□□□□□ -0.67
USP3-203ENST00000538686 KCNG3Q8TAE7 436 aa10.86□□□□□ -0.67
USP3-203ENST00000538686 MEGF9Q9H1U4 602 aa10.86□□□□□ -0.67
USP3-203ENST00000538686 MRPL22Q9NWU5 206 aaKnown RBP10.86□□□□□ -0.67
USP3-203ENST00000538686 R4GMQ9 66 aa10.86□□□□□ -0.67
USP3-203ENST00000538686 EML5Q05BV3 1969 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 LOC107986453A0A1B0GWG9 222 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 SERPINE3A8MV23 424 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 DIRC3C9JPN6 131 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 J3QR06 171 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 CTSEP14091 401 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 AADACP22760 399 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 TMEM187Q14656 261 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 ALG10Q5BKT4 473 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 DNM1P34Q6PK57 102 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 C2orf73Q8N5S3 287 aaPredicted RBP10.85□□□□□ -0.67
USP3-203ENST00000538686 OR52L2PQ8NGH6 319 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 ZNF596Q8TC21 504 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 WFDC5Q8TCV5 224 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 C18orf12Q96KH6 178 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 LMLNQ96KR4 655 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 LRFN3Q9BTN0 628 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 NAA60Q9H7X0 242 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 PATZ1Q9HBE1 687 aaKnown RBP10.85□□□□□ -0.67
USP3-203ENST00000538686 DNAJB12Q9NXW2 375 aaKnown RBP10.85□□□□□ -0.67
USP3-203ENST00000538686 C19orf53Q9UNZ5 99 aaPredicted RBP10.85□□□□□ -0.67
USP3-203ENST00000538686 APBA3O96018 575 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 CDKN1AP38936 164 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 HINT1P49773 126 aaPredicted RBP10.85□□□□□ -0.67
USP3-203ENST00000538686 BIDP55957 195 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 PPP1CBP62140 327 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 PLPPR5Q32ZL2 321 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 FAM71F2Q6NXP2 309 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 LIAT1Q6ZQX7 453 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 COX15Q7KZN9 410 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 BHLHA15Q7RTS1 189 aaPredicted RBP10.85□□□□□ -0.67
USP3-203ENST00000538686 NRSN1Q8IZ57 195 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 RAB42Q8N4Z0 105 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 LRRC75AQ8NAA5 344 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 AMELYQ99218 206 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 REPIN1Q9BWE0 567 aaKnown RBP10.85□□□□□ -0.67
USP3-203ENST00000538686 SAMD10Q9BYL1 202 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 VN1R1Q9GZP7 353 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 AICDAQ9GZX7 198 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 C11orf1Q9H5F2 150 aa10.85□□□□□ -0.67
USP3-203ENST00000538686 A0A0G2JLL6 359 aaPredicted RBP10.84□□□□□ -0.67
USP3-203ENST00000538686 IGLC7A0M8Q6 106 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 MYADML2A6NDP7 307 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 CEBPZOSA8MTT3 80 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 ADM5C9JUS6 153 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 MSTNO14793 375 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 NUPR1O60356 82 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 IL3RAP26951 378 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 SLC11A1P49279 550 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 PLAURQ03405 335 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 PLAC9Q5JTB6 97 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 PTCRAQ6ISU1 281 aaPredicted RBP10.84□□□□□ -0.67
USP3-203ENST00000538686 PRRT2Q7Z6L0 340 aaPredicted RBP10.84□□□□□ -0.67
USP3-203ENST00000538686 TMEM217Q8N7C4 229 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 SIGLECL1Q8N7X8 197 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 PLAGL1Q9UM63 463 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 LTBP3Q9NS15 1303 aa10.84□□□□□ -0.67
USP3-203ENST00000538686 GJE1A6NN92 205 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 HIDE1A8MVS5 230 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 J3QW42 95 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 SDCBPO00560 298 aaPredicted RBP10.83□□□□□ -0.68
USP3-203ENST00000538686 TRAF3IP2O43734 574 aaPredicted RBP10.83□□□□□ -0.68
USP3-203ENST00000538686 SERPINA7P05543 415 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 IFI6P09912 130 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 PSG1P11464 419 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 WASP42768 502 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 FLT3LGP49771 235 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 YPEL3P61236 119 aaPredicted RBP10.83□□□□□ -0.68
USP3-203ENST00000538686 CD226Q15762 336 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 EXT1Q16394 746 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 SAMD13Q5VXD3 122 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 OR4A47Q6IF82 309 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 SAMD7Q7Z3H4 446 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 OR5C1Q8NGR4 320 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 ATP5SQ99766 215 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 SPIN2AQ99865 258 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 SPIN2BQ9BPZ2 258 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 ZNF665Q9H7R5 613 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 HS3ST2Q9Y278 367 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 PAPPA2Q9BXP8 1791 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 IGSF23A1L1A6 192 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 C4orf47A7E2U8 309 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 HS3ST1O14792 307 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 TM4SF4P48230 202 aa10.83□□□□□ -0.68
USP3-203ENST00000538686 SRPXP78539 464 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms