RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 MARS2Q96GW9 593 aaKnown RBP6.13□□□□□ -1.43
MSH6-209ENST00000538136 BEX4Q9NWD9 120 aaPredicted RBP6.13□□□□□ -1.43
MSH6-209ENST00000538136 CRNNQ9UBG3 495 aaPredicted RBP6.13□□□□□ -1.43
MSH6-209ENST00000538136 METRNQ9UJH8 293 aa6.13□□□□□ -1.43
MSH6-209ENST00000538136 ADAMTS20P59510 1910 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 NUDT19A8MXV4 375 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 TSC22D2O75157 780 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 GAAP10253 952 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 CD99P14209 185 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 HNF1AP20823 631 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 S100GP29377 79 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 PPP1CCP36873 323 aaKnown RBP6.12□□□□□ -1.43
MSH6-209ENST00000538136 NPY4RP50391 375 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 MMP16P51512 607 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 AP2S1P53680 142 aaPredicted RBP6.12□□□□□ -1.43
MSH6-209ENST00000538136 BTG1P62324 171 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 SPINK9Q5DT21 86 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 USP43Q70EL4 1123 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 ISOC1Q96CN7 298 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 HAVCR1Q96D42 359 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 HSPE1-MOB4S4R3N1 261 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 SSNA1O43805 119 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 CGAP01215 116 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 IGHV4-39P01824 125 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 ZNF14P17017 642 aaPredicted RBP6.12□□□□□ -1.43
MSH6-209ENST00000538136 GP2P55259 537 aaKnown RBP6.12□□□□□ -1.43
MSH6-209ENST00000538136 RUSC1-AS1Q66K80 236 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 CD300LDQ6UXZ3 194 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 TOMM5Q8N4H5 51 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 OR5H2Q8NGV7 314 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 KIRREL1Q96J84 757 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 GSX1Q9H4S2 264 aaPredicted RBP6.12□□□□□ -1.43
MSH6-209ENST00000538136 DLL4Q9NR61 685 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 STEAP1Q9UHE8 339 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 ZNF221Q9UK13 617 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 UBE2J1Q9Y385 318 aaPredicted RBP6.12□□□□□ -1.43
MSH6-209ENST00000538136 IGHV3-21A0A0B4J1V1 117 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 A0A1W2PPH5 198 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 SIAH2O43255 324 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 ZNF780AO75290 641 aaPredicted RBP6.12□□□□□ -1.43
MSH6-209ENST00000538136 DIRAS3O95661 229 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 EFNB2P52799 333 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 PDZK1IP1Q13113 114 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 ZMYND11Q15326 602 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 TBCEQ15813 527 aaPredicted RBP6.12□□□□□ -1.43
MSH6-209ENST00000538136 CR1LQ2VPA4 569 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 AADACL3Q5VUY0 350 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 CATSPERDQ86XM0 798 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 OR2AK2Q8NG84 335 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 GRPEL2Q8TAA5 225 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 PP6455Q8WZ26 134 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 ABHD14BQ96IU4 210 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 GPX7Q96SL4 187 aaPredicted RBP6.12□□□□□ -1.43
MSH6-209ENST00000538136 REPIN1Q9BWE0 567 aaKnown RBP6.12□□□□□ -1.43
MSH6-209ENST00000538136 REG4Q9BYZ8 158 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 GABARAPL1Q9H0R8 117 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 PPIL3Q9H2H8 161 aaKnown RBP6.12□□□□□ -1.43
MSH6-209ENST00000538136 MPC1Q9Y5U8 109 aa6.12□□□□□ -1.43
MSH6-209ENST00000538136 C5orf51A6NDU8 294 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 ST8SIA5O15466 376 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 PTBP3O95758 552 aaKnown RBP6.11□□□□□ -1.43
MSH6-209ENST00000538136 TXNDC12O95881 172 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 TK1P04183 234 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 TFAP2AP05549 437 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 CPEP16870 476 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 KCNJ8Q15842 424 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 CDONQ4KMG0 1287 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 LHFPL2Q6ZUX7 228 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 CMTM4Q8IZR5 234 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 CIARTQ8N365 385 aaPredicted RBP6.11□□□□□ -1.43
MSH6-209ENST00000538136 SPERTQ8NA61 448 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 DMBX1Q8NFW5 382 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 RAB2BQ8WUD1 216 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 DUSP21Q9H596 190 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 ZNF665Q9H7R5 613 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 GCM1Q9NP62 436 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 INPP5EQ9NRR6 644 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 AUP1Q9Y679 476 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 ARRDC5A6NEK1 342 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 SHISA9B4DS77 424 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 INAFM1C9JVW0 142 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 F2RL2O00254 374 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 MLNRO43193 412 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 ARG1P05089 322 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 EGR1P18146 543 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 FGF12P61328 243 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 DEFB113Q30KQ7 82 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 FAM53AQ6NSI3 398 aaPredicted RBP6.11□□□□□ -1.43
MSH6-209ENST00000538136 IDO2Q6ZQW0 420 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 FAM90A1Q86YD7 464 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 SYS1Q8N2H4 156 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 OIT3Q8WWZ8 545 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 PINX1Q96BK5 328 aaKnown RBP6.11□□□□□ -1.43
MSH6-209ENST00000538136 TMEM246Q9BRR3 403 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 C1QTNF5Q9BXJ0 243 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 METTL8Q9H825 291 aaKnown RBP6.11□□□□□ -1.43
MSH6-209ENST00000538136 FAM206AQ9NX38 181 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 COPZ2Q9P299 210 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 TRBV23-1A0A0A0MS06 115 aa6.11□□□□□ -1.43
MSH6-209ENST00000538136 TMEM129A0AVI4 362 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms