RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 BNIP2Q12982 314 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 C16orf72Q14CZ0 275 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 TSC22D1Q15714 1073 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 BCL2A1Q16548 175 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 AVPI1Q5T686 147 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 NCBP2-AS2Q69YL0 99 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 H3F3CQ6NXT2 135 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 TTC33Q6PID6 262 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-205ENST00000537869 WDR82Q6UXN9 313 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 LINC00523Q86TU6 105 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 POP5Q969H6 163 aaKnown RBP3.6□□□□□ -1.83
SNHG1-205ENST00000537869 SLC35B4Q969S0 331 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 ISOC2Q96AB3 205 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 TMIGD2Q96BF3 282 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 C12orf43Q96C57 262 aaKnown RBP3.6□□□□□ -1.83
SNHG1-205ENST00000537869 DCPSQ96C86 337 aaKnown RBP3.6□□□□□ -1.83
SNHG1-205ENST00000537869 CENPNQ96H22 339 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-205ENST00000537869 PPP1R2P1Q96PQ5 205 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 MRPL57Q9BQC6 102 aaKnown RBP3.6□□□□□ -1.83
SNHG1-205ENST00000537869 NDFIP1Q9BT67 221 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 KIFC1Q9BW19 673 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 SHCBP1LQ9BZQ2 653 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 SLIRPQ9GZT3 109 aaKnown RBP3.6□□□□□ -1.83
SNHG1-205ENST00000537869 DHX35Q9H5Z1 703 aaKnown RBP3.6□□□□□ -1.83
SNHG1-205ENST00000537869 CXorf21Q9HAI6 301 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 FANCEQ9HB96 536 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 DYRK4Q9NR20 520 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 GID8Q9NWU2 228 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 ADA2Q9NZK5 511 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 ACOT9Q9Y305 439 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 NDUFAF1Q9Y375 327 aa3.6□□□□□ -1.83
SNHG1-205ENST00000537869 NLRC5Q86WI3 1866 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 PSMD12O00232 456 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-205ENST00000537869 UBDO15205 165 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 HSBP1O75506 76 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 SEMA3DO95025 777 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 NPPAP01160 153 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 RBP1P09455 135 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 TACSTD2P09758 323 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 OCM2P0CE71 109 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 OCMP0CE72 109 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-205ENST00000537869 S100A1P23297 94 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 PSMD4P55036 377 aaKnown RBP3.59□□□□□ -1.83
SNHG1-205ENST00000537869 SYNJ2BPP57105 145 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 CACNG7P62955 275 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 STK11Q15831 433 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 NDUFA5Q16718 116 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 TCEAL5Q5H9L2 206 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 COQ5Q5HYK3 327 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 FAM78AQ5JUQ0 283 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 RBM48Q5RL73 367 aaKnown RBP3.59□□□□□ -1.83
SNHG1-205ENST00000537869 ZNF691Q5VV52 312 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 LCN8Q6JVE9 175 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 NANOGP8Q6NSW7 305 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 PID1Q7Z2X4 250 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 VTCN1Q7Z7D3 282 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 DHFR2Q86XF0 187 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 CLVS1Q8IUQ0 354 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-205ENST00000537869 NKAIN4Q8IVV8 208 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 ZNF567Q8N184 647 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 OR10W1Q8NGF6 305 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 OR5T3Q8NGG3 340 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 OR8U1Q8NH10 309 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 UBA3Q8TBC4 463 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 SPPL2BQ8TCT7 592 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 RAB2BQ8WUD1 216 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 S100ZQ8WXG8 99 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 TCEAL3Q969E4 200 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 SGTBQ96EQ0 304 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 RDH12Q96NR8 316 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 CGREF1Q99674 301 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 MROQ9BYG7 248 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 WDR55Q9H6Y2 383 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-205ENST00000537869 TMEM27Q9HBJ8 222 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 MYOZ1Q9NP98 299 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-205ENST00000537869 ERGIC3Q9Y282 383 aa3.59□□□□□ -1.83
SNHG1-205ENST00000537869 COL4A4P53420 1690 aaPredicted RBP3.59□□□□□ -1.84
SNHG1-205ENST00000537869 SMIM26A0A096LP01 95 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 ARPC4-TTLL3A0A0A6YYG9 625 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 A0A0U1RQV1 116 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 DHRS12A0PJE2 317 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 PRORSD1PA6NEY8 169 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 DNASE2O00115 360 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-205ENST00000537869 MRASO14807 208 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 MPDU1O75352 247 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 MED6O75586 246 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 SLC35E2BP0CK96 405 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 CXCL8P10145 99 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 CD37P11049 281 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 HOXB8P17481 243 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-205ENST00000537869 PMCHP20382 165 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 PFN2P35080 140 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 KIR3DL2P43630 455 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 GABARAPL2P60520 117 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 CRADDP78560 199 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 LOXL1Q08397 574 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-205ENST00000537869 PMS2P3Q13401 168 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 ZNF846Q147U1 533 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 RGS21Q2M5E4 152 aa3.58□□□□□ -1.84
SNHG1-205ENST00000537869 GOLGA7BQ2TAP0 167 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms