RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 SIGLECL1Q8N7X8 197 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 CSNK2A3Q8NEV1 391 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 OTOSQ8NHW6 89 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 C11orf40Q8WZ69 217 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 OR6C1Q96RD1 312 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 B4GALT6Q9UBX8 382 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 TAC3Q9UHF0 121 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 IGHV2-26A0A0B4J1V2 119 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 A0A0U1RQK1 487 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 IGLC7A0M8Q6 106 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 ZNF891A8MT65 544 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 CEBPZOSA8MTT3 80 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 RBFOX2O43251 390 aaKnown RBP eCLIP7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 GOSR1O95249 250 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 HLA-HP01893 362 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 KLKB1P03952 638 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 VSIG8P0DPA2 414 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 HIST1H1DP16402 221 aaKnown RBP7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 SQSTM1Q13501 440 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 SLC22A24Q8N4F4 322 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 OR2I1PQ8NGU4 316 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 OR1E3Q8WZA6 343 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 VN1R1Q9GZP7 353 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 PLEKHF2Q9H8W4 249 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 RBPJLQ9UBG7 517 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 TICRRQ7Z2Z1 1910 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 PCNTO95613 3336 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 SDCBPO00560 298 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 MSTNO14793 375 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 RAMP3O60896 148 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 JMJD7P0C870 316 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 ASCL1P50553 236 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 KRTDAPP60985 99 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 DCST2Q5T1A1 773 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 ZNF793Q6ZN11 406 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 LYPD6Q86Y78 171 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 ARHGEF39Q8N4T4 335 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 C2orf73Q8N5S3 287 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 TMEM217Q8N7C4 229 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 PARLQ9H300 379 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 CES1P1Q9UKY3 287 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 PSG11Q9UQ72 335 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 RFNGQ9Y644 331 aa7.45□□□□□ -1.22
SRGAP1-202ENST00000537556 A0A1W2PNV4 684 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 PROB1E7EW31 1015 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 G3V4G9 280 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 RENP00797 406 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 HIST1H1TP22492 207 aaPredicted RBP7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 IL3RAP26951 378 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 LGALS7P47929 136 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 QRFPP83859 136 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 EXT1Q16394 746 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 ITPRIPL2Q3MIP1 535 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 LINC00114Q6XXX2 140 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 WFDC8Q8IUA0 241 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 SAXO1Q8IYX7 474 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 OR5AR1Q8NGP9 310 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 OR11L1Q8NGX0 322 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 PSMF1Q92530 271 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 SCARF2Q96GP6 870 aaPredicted RBP7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 PTPN18Q99952 460 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 A0A1B0GUS0 222 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 TNFRSF10CO14798 259 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 SPINT1O43278 529 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 GDF9O60383 454 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 NPIPB7O75200 414 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 STC2O76061 302 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 CTSEP14091 401 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 AADACP22760 399 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 GRK6P43250 576 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 SNU13P55769 128 aaKnown RBP7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 TAS2R30P59541 319 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 CSNK1G2P78368 415 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 PLPPR5Q32ZL2 321 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 C1orf140Q5VVS0 124 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 RAET1LQ5VY80 246 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 SLC18B1Q6NT16 456 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 LRTM2Q8N967 370 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 OR10W1Q8NGF6 305 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 OR5C1Q8NGR4 320 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 ARRDC3Q96B67 414 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 ZNF681Q96N22 645 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 KLHDC3Q9BQ90 382 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 ST6GALNAC5Q9BVH7 336 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 ZNF665Q9H7R5 613 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 CLEC4EQ9ULY5 219 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 SLC5A6Q9Y289 635 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 ANAPC1Q9H1A4 1944 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 THSD7BQ9C0I4 1608 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 FAM24AA6NFZ4 105 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 M0R296 226 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 CRISP2P16562 243 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 ANOS1P23352 680 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 RPS27P42677 84 aaKnown RBP7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 PPP1CBP62140 327 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 RPS4XP62701 263 aaKnown RBP7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 SRPXP78539 464 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 BAXQ07812 192 aa7.44□□□□□ -1.22
SRGAP1-202ENST00000537556 EMC4Q5J8M3 183 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms