RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 OR2G2Q8NGZ5 317 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 OR10AC1Q8NH08 325 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 PP6455Q8WZ26 134 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 SGCDQ92629 289 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 RFT1Q96AA3 541 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 PHF21AQ96BD5 680 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 OSBPL10Q9BXB5 764 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 GABARAPL3Q9BY60 117 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 HMG20AQ9NP66 347 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 NECAP2Q9NVZ3 263 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 AURKAIP1Q9NWT8 199 aaPredicted RBP6.77□□□□□ -1.33
USP28-203ENST00000537490 FRRS1LQ9P0K9 344 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 DPM3Q9P2X0 92 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 ENOPH1Q9UHY7 261 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 GSTK1Q9Y2Q3 226 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 FAM172BPA6NC97 362 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 OR2H2O95918 312 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 CYB5AP00167 134 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 IGLL1P15814 213 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 PRKACBP22694 351 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 CDK2P24941 298 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 GLIPR1P48060 266 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 AESQ08117 197 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 PDZK1IP1Q13113 114 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 UTF1Q5T230 341 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 FOXB2Q5VYV0 432 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 ZBTB49Q6ZSB9 765 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 LHFPL2Q6ZUX7 228 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 FAM220AQ7Z4H9 259 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 CORO2AQ92828 525 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 STMN2Q93045 179 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 SPACA5Q96QH8 159 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 MBOAT4Q96T53 435 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 EXOSC4Q9NPD3 245 aaKnown RBP6.76□□□□□ -1.33
USP28-203ENST00000537490 FAM53CQ9NYF3 392 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 GLS2Q9UI32 602 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 OAZ3Q9UMX2 235 aa6.76□□□□□ -1.33
USP28-203ENST00000537490 UBE2J1Q9Y385 318 aaPredicted RBP6.76□□□□□ -1.33
USP28-203ENST00000537490 TRGV10A0A0A0MS01 117 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 SH2D7A6NKC9 451 aaPredicted RBP6.75□□□□□ -1.33
USP28-203ENST00000537490 SAC3D1A6NKF1 404 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 J3QRE1 110 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 SH2D1BO14796 132 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 KDM4BO94953 1096 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 ALX3O95076 343 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 IGLV1-47P01700 117 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 AMY1AP04745 511 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 AMY2AP04746 511 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 ALDOBP05062 364 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 ISG15P05161 165 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 LPLP06858 475 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 FCGR1AP12314 374 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 ZNF20P17024 532 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 CD33P20138 364 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 LMO1P25800 156 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 CD34P28906 385 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 CDC42P60953 191 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 BDH1Q02338 343 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 IL18R1Q13478 541 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 ABCA11PQ4W5N1 156 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 SPIN3Q5JUX0 258 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 C1orf146Q5VVC0 180 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 OR52W1Q6IF63 320 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 Q6P435 159 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 FDX2Q6P4F2 183 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 C10orf99Q6UWK7 81 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 HEPN1Q6WQI6 88 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 CCDC121Q6ZUS5 278 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 C16orf82Q7Z2V1 217 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 CENPVQ7Z7K6 275 aaPredicted RBP6.75□□□□□ -1.33
USP28-203ENST00000537490 RTN4RL2Q86UN3 420 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 OR51A4Q8NGJ6 313 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 OR5D18Q8NGL1 313 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 RFKQ969G6 155 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 SPSB1Q96BD6 273 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 RNFT2Q96EX2 444 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 CENPNQ96H22 339 aaPredicted RBP6.75□□□□□ -1.33
USP28-203ENST00000537490 COQ2Q96H96 371 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 OPALINQ96PE5 141 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 SLC25A33Q9BSK2 321 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 COMMD4Q9H0A8 199 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 LIN7BQ9HAP6 207 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 ZNF286AQ9HBT8 521 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 ING3Q9NXR8 418 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 TAS2R3Q9NYW6 316 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 AASSQ9UDR5 926 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 HHLA2Q9UM44 414 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 ZNF281Q9Y2X9 895 aa6.75□□□□□ -1.33
USP28-203ENST00000537490 DSCAML1Q8TD84 2053 aa6.74□□□□□ -1.33
USP28-203ENST00000537490 TCRBV4S1A1TA0A5B7 111 aa6.74□□□□□ -1.33
USP28-203ENST00000537490 DAPL1A0PJW8 107 aa6.74□□□□□ -1.33
USP28-203ENST00000537490 ODAMA1E959 279 aa6.74□□□□□ -1.33
USP28-203ENST00000537490 FUOMA2VDF0 154 aa6.74□□□□□ -1.33
USP28-203ENST00000537490 OR4C45A6NMZ5 311 aa6.74□□□□□ -1.33
USP28-203ENST00000537490 LEUTXA8MZ59 168 aa6.74□□□□□ -1.33
USP28-203ENST00000537490 E9PQ18 207 aa6.74□□□□□ -1.33
USP28-203ENST00000537490 LY6LH3BQJ8 138 aa6.74□□□□□ -1.33
USP28-203ENST00000537490 H3BUI4 141 aa6.74□□□□□ -1.33
USP28-203ENST00000537490 J3QLW9 94 aa6.74□□□□□ -1.33
USP28-203ENST00000537490 SLC16A6O15403 523 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms