RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 NKAIN3Q8N8D7 197 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 OR52N4Q8NGI2 321 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 H1FXQ92522 213 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 SDSLQ96GA7 329 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 SPACA5Q96QH8 159 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 GPER1Q99527 375 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 PPIL3Q9H2H8 161 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 RASL12Q9NYN1 266 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 ONECUT1Q9UBC0 465 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 GSTK1Q9Y2Q3 226 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 IGHV1-69DA0A0B4J2H0 117 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 CYB5AP00167 134 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 IGHV1-69P01742 117 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 TFAP2AP05549 437 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 HKR1P10072 659 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 GADD45AP24522 165 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 FGF9P31371 208 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 POU3F4P49335 361 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 AWAT1Q58HT5 328 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 C22orf42Q6IC83 251 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 Q8N7P7 452 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 OR13F1Q8NGS4 319 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 SLC25A28Q96A46 364 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 RFT1Q96AA3 541 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 YIPF6Q96EC8 236 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 CHCHD6Q9BRQ6 235 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 OR51E2Q9H255 320 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 ELL3Q9HB65 397 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 HES4Q9HCC6 221 aa14.68□□□□□ -0.06
TNFRSF1A-209ENST00000536717 RFPL4AA6NLU0 287 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 RFPL4AL1F8VTS6 287 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 HOXA3O43365 443 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 NDUFB7P17568 137 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 MYL9P24844 172 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 ZNF93P35789 620 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 ALDH3B2P48448 385 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 DLX1P56177 255 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 IL24Q13007 206 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 SMIM21Q3B7S5 101 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 GPR141Q7Z602 305 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 PDZD9Q8IXQ8 264 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 BATF2Q8N1L9 274 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 CD177Q8N6Q3 437 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 KIR3DL3Q8N743 410 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 NRIP2Q9BQI9 281 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 SIRT7Q9NRC8 400 aa14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 TXNL4BQ9NX01 149 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1A-209ENST00000536717 LOC100506127A0A0U1RQW1 187 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 RPL5P46777 297 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 ERVK11-1P61568 191 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 PDZK1IP1Q13113 114 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 METAP1DQ6UB28 335 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 Q6YL49 198 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 GDPGP1Q6ZNW5 385 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 SLC25A26Q70HW3 274 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 CDH26Q8IXH8 852 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 MKXQ8IYA7 352 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 JAGN1Q8N5M9 183 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 TMEM185AQ8NFB2 350 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 OR5D18Q8NGL1 313 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 ZDHHC16Q969W1 377 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 KIAA2026Q5HYC2 2103 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 AIREO43918 545 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 NXPH2O95156 264 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 TMEM225BP0DP42 221 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 CEBPDP49716 269 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 PRB3Q04118 309 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 GLT8D1Q68CQ7 371 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 LRRTM1Q86UE6 522 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 CMTM4Q8IZR5 234 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 PIP4P2Q8N4L2 257 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 TAF15Q92804 592 aaKnown RBP eCLIP14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 TNFRSF14Q92956 283 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 FUNDC2Q9BWH2 189 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 FAM192AQ9GZU8 254 aa14.66□□□□□ -0.06
TNFRSF1A-209ENST00000536717 TRAV1-2A0A0B4J238 106 aa14.65□□□□□ -0.06
TNFRSF1A-209ENST00000536717 RNASEK-C17orf49H0YIS7 233 aa14.65□□□□□ -0.06
TNFRSF1A-209ENST00000536717 SPRY1O43609 319 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-209ENST00000536717 MELTFP08582 738 aa14.65□□□□□ -0.06
TNFRSF1A-209ENST00000536717 PRDX2P32119 198 aa14.65□□□□□ -0.06
TNFRSF1A-209ENST00000536717 C16orf87Q6PH81 154 aa14.65□□□□□ -0.06
TNFRSF1A-209ENST00000536717 RNF144BQ7Z419 303 aa14.65□□□□□ -0.06
TNFRSF1A-209ENST00000536717 C3orf56Q8N813 242 aa14.65□□□□□ -0.06
TNFRSF1A-209ENST00000536717 ZSCAN4Q8NAM6 433 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-209ENST00000536717 TNFAIP8L1Q8WVP5 186 aa14.65□□□□□ -0.06
TNFRSF1A-209ENST00000536717 FOXRED1Q96CU9 486 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-209ENST00000536717 KCTD7Q96MP8 289 aa14.65□□□□□ -0.06
TNFRSF1A-209ENST00000536717 MTCH1Q9NZJ7 389 aa14.65□□□□□ -0.06
TNFRSF1A-209ENST00000536717 NBEAL1Q6ZS30 2694 aa14.64□□□□□ -0.07
TNFRSF1A-209ENST00000536717 TRRAPQ9Y4A5 3859 aa14.64□□□□□ -0.07
TNFRSF1A-209ENST00000536717 A0A0U1RQK1 487 aa14.64□□□□□ -0.07
TNFRSF1A-209ENST00000536717 A0A1W2PQ09 198 aa14.64□□□□□ -0.07
TNFRSF1A-209ENST00000536717 F8VVB4 439 aa14.64□□□□□ -0.07
TNFRSF1A-209ENST00000536717 F8VWA3 439 aa14.64□□□□□ -0.07
TNFRSF1A-209ENST00000536717 PDCD5O14737 125 aa14.64□□□□□ -0.07
TNFRSF1A-209ENST00000536717 PSMD7P51665 324 aa14.64□□□□□ -0.07
TNFRSF1A-209ENST00000536717 ZP1P60852 638 aa14.64□□□□□ -0.07
TNFRSF1A-209ENST00000536717 FOXL1Q12952 345 aa14.64□□□□□ -0.07
TNFRSF1A-209ENST00000536717 KLRD1Q13241 179 aa14.64□□□□□ -0.07
TNFRSF1A-209ENST00000536717 CRIP3Q6Q6R5 217 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms